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SCN18_13_7_16_R1_B_scaffold_625

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_625_1
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..613)
DNA (612bp) protein (204aa)
ABC transporter permease n=1 Tax=Streptomyces sp. CNT372 RepID=UPI00035D0A8F
ABC transporter permease {ECO:0000313|EMBL:KJY43333.1}; Flags: Fragment;; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
Putrescine transport system permease protein PotH
SCN18_13_7_16_R1_B_scaffold_625_2
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(683..1837)
DNA (1155bp) protein (385aa)
ABC transporter polyamine-binding lipoprotein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQ03_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65220.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
family 1 extracellular solute-binding protein
SCN18_13_7_16_R1_B_scaffold_625_3
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1834..2019)
DNA (186bp) protein (62aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7I7_CONWI
spermidine/putrescine ABC transporter ATPase
SCN18_13_7_16_R1_B_scaffold_625_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3078..5099)
DNA (2022bp) protein (674aa)
UPI0003CED0BB related cluster n=1 Tax=unknown RepID=UPI0003CED0BB
Amidase {ECO:0000313|EMBL:CDX20297.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
amidase
SCN18_13_7_16_R1_B_scaffold_625_5
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5106..6140)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AWY0_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH53903.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCN18_13_7_16_R1_B_scaffold_625_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6291..6962
DNA (672bp) protein (224aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Endonuclease NucS n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCH1_CONWI
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_625_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6963..7946)
DNA (984bp) protein (328aa)
Putative pyridoxal phosphate-dependent deaminase n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E9M8_NOCAS
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:GAM46660.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
SCN18_13_7_16_R1_B_scaffold_625_8
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7990..8466
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J209_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC83395.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
SCN18_13_7_16_R1_B_scaffold_625_9
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8473..10995)
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000360790F
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACL73756.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
SCN18_13_7_16_R1_B_scaffold_625_10
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11141..15091
DNA (3951bp) protein (1317aa)
subtilisin (EC:3.4.21.62)
Putative Subtilisin {ECO:0000313|EMBL:CCH89858.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CCH89858.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376E4A8
SCN18_13_7_16_R1_B_scaffold_625_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15096..16292)
DNA (1197bp) protein (399aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECC7
SCN18_13_7_16_R1_B_scaffold_625_12
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

16382..17572
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI000375C62C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53499.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_625_13
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17619..18974
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodococcus qingshengii BKS 20-40 RepID=M2V0M1_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDQ03059.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_625_14
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18977..20620
DNA (1644bp) protein (548aa)
sulfatase n=1 Tax=Rhodococcus rhodochrous RepID=UPI000364AFF8
sulfatase
Sulfatase {ECO:0000313|EMBL:KHJ74393.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
SCN18_13_7_16_R1_B_scaffold_625_15
unknown

Not on your lists

20617..21036
DNA (420bp) protein (140aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_625_16
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21051..21836
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E7L9_NOCAS
Lysophospholipase {ECO:0000313|EMBL:KHL10490.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
lysophospholipase
SCN18_13_7_16_R1_B_scaffold_625_17
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21855..22661)
DNA (807bp) protein (269aa)
amidohydrolase n=1 Tax=Mycobacterium avium RepID=UPI00036BCB4E
Amidohydrolase {ECO:0000313|EMBL:GAM44550.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_625_18
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22658..23125)
DNA (468bp) protein (156aa)
Transcriptional regulator n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SA88_HAHCH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABC32436.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCN18_13_7_16_R1_B_scaffold_625_19
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23165..23455
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5U819_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB41877.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_625_20
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23597..24346
DNA (750bp) protein (250aa)
SCN18_13_7_16_R1_B_scaffold_625_21
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24386..25288)
DNA (903bp) protein (301aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FER5_CONWI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB49739.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_625_22
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25301..26821)
DNA (1521bp) protein (507aa)
Endo-14-beta-glucanase n=1 Tax=Patulibacter medicamentivorans RepID=H0E753_9ACTN
Endo-14-beta-glucanase {ECO:0000313|EMBL:EHN10498.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
glycoside hydrolase family protein
SCN18_13_7_16_R1_B_scaffold_625_23
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26966..28312
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1Q2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54083.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_625_24
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28309..29370
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1Q1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54082.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_625_25
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29367..29828
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MC57_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:ELS24334.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_625_26
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29833..30348
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQH2_MICPN
GCN5-related N-acetyltransferase
Acetyltransferase, GNAT family protein {ECO:0000313|EMBL:KIA73892.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
SCN18_13_7_16_R1_B_scaffold_625_27
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30553..31260)
DNA (708bp) protein (236aa)
Alanine racemase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGW8_CHIPD
Contig58, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76647.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
alanine racemase
SCN18_13_7_16_R1_B_scaffold_625_28
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31257..33158)
DNA (1902bp) protein (634aa)
Glycoside hydrolase 15-related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F007_CONWI
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ADB49983.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_625_29
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33226..34155
DNA (930bp) protein (310aa)
Membrane protein-like protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4I7_9ACTN
cytochrome C oxidase caa3-type, assembly factor CtaG-related protein
Tax=RBG_16_Actinobacteria_68_12_curated
SCN18_13_7_16_R1_B_scaffold_625_30
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34139..35686
DNA (1548bp) protein (516aa)
Spermine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F013_CONWI
spermine synthase
Spermine synthase {ECO:0000313|EMBL:ADB49989.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 35 in total

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