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SCN18_13_7_16_R1_B_scaffold_1913

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1913_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
glyoxalase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036FD8F1
Uncharacterized protein {ECO:0000313|EMBL:CDX28043.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glyoxalase family protein
SCN18_13_7_16_R1_B_scaffold_1913_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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261..1274
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WYC0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR48454.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Protein of unknown function
SCN18_13_7_16_R1_B_scaffold_1913_3
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1302..2492
DNA (1191bp) protein (397aa)
UPI0003D798AE related cluster n=1 Tax=unknown RepID=UPI0003D798AE
Uncharacterized protein {ECO:0000313|EMBL:KEF98368.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
SCN18_13_7_16_R1_B_scaffold_1913_4
CN-SCN_Plasmid_4851x, CN-SCN_Plasmid_4851x, CN-SCN_Plasmid_4851x, CN-SCN_Plasmid_4851x, CN-SCN_Plasmid_4851x, Mobile_element

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comp(2489..3367)
DNA (879bp) protein (293aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SD29_9BURK
DNA modification methylase
SCN18_13_7_16_R1_B_scaffold_1913_5
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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3420..4451
DNA (1032bp) protein (344aa)
UPI0003D6BFC5 related cluster n=1 Tax=unknown RepID=UPI0003D6BFC5
peroxidase
Peroxidase {ECO:0000313|EMBL:KHJ72089.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
SCN18_13_7_16_R1_B_scaffold_1913_6
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4477..5082
DNA (606bp) protein (202aa)
mug; G/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
G:T/U mismatch-specific uracil/thymine DNA-glycosylase n=1 Tax=Patulibacter medicamentivorans RepID=H0E749_9ACTN
G:T/U mismatch-specific uracil/thymine DNA-glycosylase {ECO:0000313|EMBL:EHN10494.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCN18_13_7_16_R1_B_scaffold_1913_7
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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5079..5756
DNA (678bp) protein (226aa)
Putative ATP binding protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LWS9_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KGM14938.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ATP binding protein
SCN18_13_7_16_R1_B_scaffold_1913_8
unknown

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5797..6753
DNA (957bp) protein (319aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_1913_9
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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comp(6772..9477)
DNA (2706bp) protein (902aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. e14 RepID=D6KD90_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFF89045.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1913_10
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9619..10680
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000363BA79
Uncharacterized protein {ECO:0000313|EMBL:KGF68107.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
putative uncharacterized protein
SCN18_13_7_16_R1_B_scaffold_1913_11
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10742..11188)
DNA (447bp) protein (149aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Catalase-peroxidase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGA8_NAKMY
catalase/peroxidase HPI
Displaying 11 items

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