ggKbase home page

SCN18_10_11_15_R4_P_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_152_1
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
Cation-transporting ATPase PacS {ECO:0000313|EMBL:EWS56606.1}; EC=3.6.3.- {ECO:0000313|EMBL:EWS56606.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK
Lead, cadmium, zinc and mercury transporting ATPase
SCN18_10_11_15_R4_P_scaffold_152_2
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(403..1584)
DNA (1182bp) protein (394aa)
nickel transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI000289AB36
High-affinity nickel-transporter {ECO:0000313|EMBL:KFC64628.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
high-affinity nickel-transporter
SCN18_10_11_15_R4_P_scaffold_152_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1592..1873)
DNA (282bp) protein (94aa)
UPI0003CE59A7 related cluster n=1 Tax=unknown RepID=UPI0003CE59A7
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESY73943.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_4
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1973..2362
DNA (390bp) protein (130aa)
UPI0003CED85D related cluster n=1 Tax=unknown RepID=UPI0003CED85D
Uncharacterized protein {ECO:0000313|EMBL:ESX10485.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
SCN18_10_11_15_R4_P_scaffold_152_5
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2411..3142
DNA (732bp) protein (244aa)
UPI0003CF0042 related cluster n=1 Tax=unknown RepID=UPI0003CF0042
Membrane protein {ECO:0000313|EMBL:ESX49067.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
membrane protein
SCN18_10_11_15_R4_P_scaffold_152_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3163..3819
DNA (657bp) protein (219aa)
UPI0003CFE27A related cluster n=1 Tax=unknown RepID=UPI0003CFE27A
Uncharacterized protein {ECO:0000313|EMBL:ESZ23408.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_7
unknown

Not on your lists

4071..4409
DNA (339bp) protein (113aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_152_8
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4815..6995
DNA (2181bp) protein (727aa)
ParB domain protein nuclease n=2 Tax=Oligotropha carboxidovorans RepID=B6JHM0_OLICO
Uncharacterized protein YubM {ECO:0000313|EMBL:AEI06302.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
yubM; hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_9
unknown

Not on your lists

comp(7188..7541)
DNA (354bp) protein (118aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_152_10
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7751..7987
DNA (237bp) protein (79aa)
UPI0003CF267A related cluster n=1 Tax=unknown RepID=UPI0003CF267A
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX79367.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
transcriptional repressor
SCN18_10_11_15_R4_P_scaffold_152_11
unknown

Not on your lists

8496..9770
DNA (1275bp) protein (425aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_152_12
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9938..10249
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7F7T8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ09242.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_13
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10369..10653)
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Pseudomonas sp. GM48 RepID=J2ZTR7_9PSED
relE1; stability cassette protein
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EJM56418.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
SCN18_10_11_15_R4_P_scaffold_152_14
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10643..10888)
DNA (246bp) protein (82aa)
RelB/StbD replicon stabilization protein (Antitoxin to RelE/StbE) n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MKH7_PSEPS
RelB/StbD replicon stabilization protein (Antitoxin to RelE/StbE) {ECO:0000313|EMBL:ELS26935.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_15
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11333..11746
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06307.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_10_11_15_R4_P_scaffold_152_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..13422
DNA (1356bp) protein (452aa)
Integrase domain protein SAM domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDG3_XANP2
integrase domain-containing protein
Integrase {ECO:0000313|EMBL:KHJ53928.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
SCN18_10_11_15_R4_P_scaffold_152_17
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13419..15260
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDG2_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KHJ53929.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15257..17422
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDG1_XANP2
Uncharacterized protein {ECO:0000313|EMBL:ABS66054.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..17859
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDG0_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66053.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_152_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18076..19002
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66052.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_152_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19019..19447)
DNA (429bp) protein (143aa)
Putative transcriptional regulator, MerR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF8_XANP2
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:KHJ53933.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
SCN18_10_11_15_R4_P_scaffold_152_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19534..19959
DNA (426bp) protein (142aa)
Mercuric transport protein MerT n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF7_XANP2
mercuric transporter MerT
Mercury transporter MerT {ECO:0000313|EMBL:KHJ53934.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
SCN18_10_11_15_R4_P_scaffold_152_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19981..20277
DNA (297bp) protein (99aa)
Heavy metal transport/detoxification protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF6_XANP2
heavy metal transport/detoxification protein
Mercury transporter {ECO:0000313|EMBL:KGJ02956.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
SCN18_10_11_15_R4_P_scaffold_152_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20279..20527
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9K0_9BRAD
Mercury transport protein {ECO:0000313|EMBL:KHJ53936.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
putative membrane protein
SCN18_10_11_15_R4_P_scaffold_152_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20524..22827
DNA (2304bp) protein (768aa)
Mercuric reductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF5_XANP2
Mercuric reductase {ECO:0000313|EMBL:ABS66048.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
mercuric reductase
SCN18_10_11_15_R4_P_scaffold_152_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22812..24221
DNA (1410bp) protein (470aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDF4_XANP2
pyridine nucleotide-disulfide oxidoreductase dimerisation region
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ABS66047.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_152_27
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24511..25251
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06307.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_10_11_15_R4_P_scaffold_152_28
scnpilot_dereplicated_Plasmid_Betaproteobacteria_1, scnpilot_dereplicated_Plasmid_Betaproteobacteria_1, scnpilot_dereplicated_Plasmid_Betaproteobacteria_1, scnpilot_dereplicated_Plasmid_Betaproteobacteria_1, scnpilot_dereplicated_Plasmid_Betaproteobacteria_1, Plasmid-like

Not on your lists

25667..26308
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AAJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAQ97067.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_152_29
scnpilot_dereplicated_Plasmid_Burkholderiales_6, scnpilot_dereplicated_Plasmid_Burkholderiales_6, scnpilot_dereplicated_Plasmid_Burkholderiales_6, scnpilot_dereplicated_Plasmid_Burkholderiales_6, scnpilot_dereplicated_Plasmid_Burkholderiales_6, Plasmid-like

Not on your lists

26424..26654
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I7JN47_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDR92724.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
SCN18_10_11_15_R4_P_scaffold_152_30
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26664..27527
DNA (864bp) protein (288aa)
Replication protein A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY49_9RHIZ
Replication protein A {ECO:0000313|EMBL:EHK54331.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
replication protein A
Displaying items 1-30 of 128 in total

View Taxonomy