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SCN18_10_11_15_R4_P_scaffold_708

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_708_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1789)
DNA (1788bp) protein (596aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMR9_XANP2
phosphoribosylformylglycinamidine synthase II
SCN18_10_11_15_R4_P_scaffold_708_2
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1818..2516)
DNA (699bp) protein (233aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMS0_XANP2
phosphoribosylformylglycinamidine synthase I
SCN18_10_11_15_R4_P_scaffold_708_3
unknown

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comp(2523..2747)
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_708_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2798..3040)
DNA (243bp) protein (81aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMS1_XANP2
phosphoribosylformylglycinamidine synthase PurS
SCN18_10_11_15_R4_P_scaffold_708_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3207..4001)
DNA (795bp) protein (265aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMS2_XANP2
phosphoribosylaminoimidazole-succinocarboxamide synthase
SCN18_10_11_15_R4_P_scaffold_708_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4358..4681
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMS3_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69316.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_7
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4779..5396)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RS4_XANP2
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_8
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5622..6182)
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=MNTP_XANP2
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000255|HAMAP-Rule:MF_01521}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_9
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6552..7259
DNA (708bp) protein (236aa)
Glutamine amidotransferase class-I n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMS6_XANP2
glutamine amidotransferase
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABS69319.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7442..8764)
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RIMO_XANP2
rimO; ribosomal protein S12 methylthiotransferase
SCN18_10_11_15_R4_P_scaffold_708_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9120..10370)
DNA (1251bp) protein (417aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02006}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02006};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02006}; Short=TyrRS {ECO:0000255|HAMAP-Rule:MF_02006};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Tyrosine--tRNA ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=SYY_XANP2
tyrosyl-tRNA synthetase
SCN18_10_11_15_R4_P_scaffold_708_12
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10473..11582
DNA (1110bp) protein (370aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000255|HAMAP-Rule:MF_01270}; EC=2.7.1.170 {ECO:0000255|HAMAP-Rule:MF_01270};; AnhMurNAc kinase {ECO:0000255|HAMAP-Rule:MF_01270}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=ANMK_XANP2
anmK; anhydro-N-acetylmuramic acid kinase
SCN18_10_11_15_R4_P_scaffold_708_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11642..12304)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INU6_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69692.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12609..13865
DNA (1257bp) protein (419aa)
Aminotransferase class V n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INU5_XANP2
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ABS69691.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_708_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13905..15359
DNA (1455bp) protein (485aa)
FeS assembly protein SufB n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INU4_XANP2
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:ABS69690.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 15 items

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