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SCN18_10_11_15_R4_P_scaffold_989

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_989_1
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1389)
DNA (1389bp) protein (463aa)
acriflavine resistance protein B n=1 Tax=Sphingomonas wittichii RepID=UPI0003110382
hydrophobe/amphiphile efflux-1 (HAE1) family protein
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ABQ68312.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_10_11_15_R4_P_scaffold_989_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1389..2528)
DNA (1140bp) protein (380aa)
RND transporter n=1 Tax=Sphingomonas wittichii RepID=UPI0002DE7C7C
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ68313.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_10_11_15_R4_P_scaffold_989_3
unknown

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comp(2580..2825)
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_989_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2946..3581)
DNA (636bp) protein (212aa)
Maleylacetoacetate isomerase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKL7_XANP2
maleylacetoacetate isomerase
Maleylacetoacetate isomerase {ECO:0000313|EMBL:ABS68560.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_989_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3660..3983)
DNA (324bp) protein (108aa)
Beta-lactamase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKJ5_METNO
GloB protein {ECO:0000313|EMBL:BAQ47390.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
beta-lactamase domain-containing protein
SCN18_10_11_15_R4_P_scaffold_989_6
CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, Mobile_element

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comp(4247..5434)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00037B5F40
Transposase {ECO:0000313|EMBL:EJC64618.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
integrase catalytic subunit
SCN18_10_11_15_R4_P_scaffold_989_trna_1
unknown

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comp(5666..5739)
DNA (74bp)
transferRNA Arg
SCN18_10_11_15_R4_P_scaffold_989_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5926..6600)
DNA (675bp) protein (225aa)
AsnC family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI0003813E96
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH88891.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCN18_10_11_15_R4_P_scaffold_989_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6905..8275
DNA (1371bp) protein (457aa)
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:ABS65777.1}; EC=4.1.1.9 {ECO:0000313|EMBL:ABS65777.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Malonyl-CoA decarboxylase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICN4_XANP2
malonyl-CoA decarboxylase
SCN18_10_11_15_R4_P_scaffold_989_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8337..9449
DNA (1113bp) protein (371aa)
AMP-dependent synthetase and ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICN3_XANP2
malonyl-CoA synthase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS65776.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 10 items

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