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SCN18_30_10_14_R3_B_scaffold_3734

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_3734_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..722)
DNA (720bp) protein (240aa)
cobalt chelatase, pCobS small subunit (EC:6.6.1.2)
Hydrogenobyrinic acid a,c-diamide cobaltochelatase {ECO:0000313|EMBL:ABD86113.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABD86113.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
aerobic cobaltochelatase subunit CobS n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DC283
SCN18_30_10_14_R3_B_scaffold_3734_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1066..1716)
DNA (651bp) protein (217aa)
Heat shock protein DnaJ domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D6_9BRAD
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:EFI53166.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
heat shock protein DnaJ
SCN18_30_10_14_R3_B_scaffold_3734_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1914..2186
DNA (273bp) protein (91aa)
BolA family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D7_9BRAD
BolA family protein {ECO:0000313|EMBL:EFI53167.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
BolA family protein
SCN18_30_10_14_R3_B_scaffold_3734_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2430..3740)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53168.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative HlyC/CorC family of transporters with 2 CBS domains
SCN18_30_10_14_R3_B_scaffold_3734_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3749..4915)
DNA (1167bp) protein (389aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
3-dehydroquinate synthase n=3 Tax=Oligotropha carboxidovorans RepID=B6JAB6_OLICO
SCN18_30_10_14_R3_B_scaffold_3734_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4912..5529)
DNA (618bp) protein (206aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
shikimate kinase n=1 Tax=Afipia birgiae RepID=UPI0002DE9CBC
SCN18_30_10_14_R3_B_scaffold_3734_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5719..5865
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P751_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37301.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_3734_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5878..6831
DNA (954bp) protein (318aa)
tyrosine recombinase XerD n=1 Tax=Afipia birgiae RepID=UPI0002E19370
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
xerD; tyrosine recombinase XerD
SCN18_30_10_14_R3_B_scaffold_3734_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6951..7049
DNA (99bp) protein (33aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000255|HAMAP-Rule:MF_00823};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Oligotropha carboxidovorans RepID=ACCA_OLICO
Displaying 9 items

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