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SCN18_30_10_14_R3_B_scaffold_1139

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_1139_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C8_9BRAD
ABC transporter related protein {ECO:0000313|EMBL:EFI50766.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ABC transporter
SCN18_30_10_14_R3_B_scaffold_1139_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466..1236)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNP5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29150.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
enoyl-CoA hydratase
SCN18_30_10_14_R3_B_scaffold_1139_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1292..3424)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ81_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29151.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acyl-CoA synthetase
SCN18_30_10_14_R3_B_scaffold_1139_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3516..4739)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEW3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29152.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
glutaryl-CoA dehydrogenase
SCN18_30_10_14_R3_B_scaffold_1139_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4792..5826)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NSF8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29153.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC transporter periplasmic substrate-binding protein
SCN18_30_10_14_R3_B_scaffold_1139_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5893..6906)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL26_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29154.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
periplasmic subtsrate-binding protein
SCN18_30_10_14_R3_B_scaffold_1139_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7014..8216)
DNA (1203bp) protein (401aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R0_9BRAD
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase {ECO:0000313|EMBL:CEG09057.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCN18_30_10_14_R3_B_scaffold_1139_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8253..9776)
DNA (1524bp) protein (508aa)
paaH; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q9_9BRAD
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:EFI50547.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_30_10_14_R3_B_scaffold_1139_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10024..10920
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q8_9BRAD
HTH-type transcriptional regulator LeuO {ECO:0000313|EMBL:CEG09059.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
LysR family transcriptional regulator
SCN18_30_10_14_R3_B_scaffold_1139_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11186..12466
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BQ55_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05864.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1139_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..12684
DNA (204bp) protein (68aa)
SCN18_30_10_14_R3_B_scaffold_1139_trna_1
unknown

Not on your lists

12675..12747
DNA (73bp)
transferRNA Met
SCN18_30_10_14_R3_B_scaffold_1139_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12887..13144
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D7_9BRAD
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000313|EMBL:CEG07037.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1139_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13161..13298)
DNA (138bp) protein (46aa)
SCN18_30_10_14_R3_B_scaffold_1139_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13308..13478)
DNA (171bp) protein (57aa)
SCN18_30_10_14_R3_B_scaffold_1139_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14228..15676
DNA (1449bp) protein (483aa)
UPI0003CFA841 related cluster n=1 Tax=unknown RepID=UPI0003CFA841
Uncharacterized protein {ECO:0000313|EMBL:KEC80212.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
AraC family transcriptional regulator
SCN18_30_10_14_R3_B_scaffold_1139_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16094..17320
DNA (1227bp) protein (409aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05354.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1139_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17333..19309
DNA (1977bp) protein (659aa)
GGDEF/EAL domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL4_OLICO
diguanylate cyclase
GGDEF/EAL domain protein {ECO:0000313|EMBL:AEI05355.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1139_18
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19431..20000)
DNA (570bp) protein (190aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V770_9BRAD
Cytochrome c class I {ECO:0000313|EMBL:EFI51080.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome c class I
SCN18_30_10_14_R3_B_scaffold_1139_19
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19981..21276)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPY9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29575.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
molybdopterin binding oxidoreductase
SCN18_30_10_14_R3_B_scaffold_1139_20
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21520..22410
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIE0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28821.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1139_21
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22500..22712
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUP7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13397.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1139_22
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22731..23969)
DNA (1239bp) protein (413aa)
Putative oxalate/formate antiporter n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QRM3_9BRAD
Putative oxalate/formate antiporter {ECO:0000313|EMBL:EGP06234.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
major facilitator transporter
SCN18_30_10_14_R3_B_scaffold_1139_23
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24278..24568
DNA (291bp) protein (97aa)
flagellar biosynthesis protein FlhA n=1 Tax=Afipia birgiae RepID=UPI0002F2DF2A
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EKS36753.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flhA; flagellar biosynthesis protein FlhA
Displaying 24 items

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