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SCN18_30_10_14_R3_B_scaffold_1947

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_1947_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(179..709)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JG07_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06150.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1947_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1126..2925
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
histidine protein kinase DivJ (EC:2.7.13.3)
Two-component sensor histidine kinase n=2 Tax=Bradyrhizobiaceae RepID=F7QL98_9BRAD
SCN18_30_10_14_R3_B_scaffold_1947_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2948..3580
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJW9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28724.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
peptidoglycan-binding domain 1
SCN18_30_10_14_R3_B_scaffold_1947_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4315..4635
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217U6_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87340.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_30_10_14_R3_B_scaffold_1947_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4945..5169)
DNA (225bp) protein (75aa)
conserved exported hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..6463)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI38_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28721.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7235..7483
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39439.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCN18_30_10_14_R3_B_scaffold_1947_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7480..7722
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CD8_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD85948.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_30_10_14_R3_B_scaffold_1947_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8092..8841)
DNA (750bp) protein (250aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219Z1_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ39799.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Crp/FNR family transcriptional regulator
SCN18_30_10_14_R3_B_scaffold_1947_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9216..9422
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000313E4C1
Uncharacterized protein {ECO:0000313|EMBL:EKS42781.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9485..10213
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJW0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28719.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10473..10862
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BIX9_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06159.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1947_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..11794
DNA (651bp) protein (217aa)
Integral membrane protein TerC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5E2_9BRAD
Integral membrane protein, YjbE family {ECO:0000313|EMBL:CEG08493.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
integral membrane protein TerC
SCN18_30_10_14_R3_B_scaffold_1947_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12143..12712)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR87_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28713.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12709..13287)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDN4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28712.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_1947_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13304..13798)
DNA (495bp) protein (165aa)
penicillin-binding protein (EC:2.4.1.129 3.4.-.-)
penicillin-binding protein 1A n=1 Tax=Afipia birgiae RepID=UPI0002E99B23
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS42019.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying 16 items

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