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SCN18_30_10_14_R3_B_scaffold_1960

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_1960_1
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1667
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MFF3_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP26010.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_30_10_14_R3_B_scaffold_1960_2
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

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comp(1700..3880)
DNA (2181bp) protein (727aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JED4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06605.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_3
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

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comp(3883..4281)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JED5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06604.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_4
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

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comp(4278..4661)
DNA (384bp) protein (128aa)
Phage protein, HK97, gp10 n=2 Tax=Oligotropha carboxidovorans RepID=B6JED6_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06603.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_5
unknown

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comp(4770..5063)
DNA (294bp) protein (98aa)
SCN18_30_10_14_R3_B_scaffold_1960_6
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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comp(5231..6334)
DNA (1104bp) protein (368aa)
Capsid protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6V0G9_9PSED
Putative phage major capsid protein {ECO:0000313|EMBL:GAK70285.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
capsid protein
SCN18_30_10_14_R3_B_scaffold_1960_7
unknown

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comp(6356..6796)
DNA (441bp) protein (147aa)

This feature has no annotations

SCN18_30_10_14_R3_B_scaffold_1960_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6811..7329)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JEK7_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06595.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7520..8284)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLR9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62828.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R3_B_scaffold_1960_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8786..10054)
DNA (1269bp) protein (423aa)
RecA-family ATPase n=2 Tax=Oligotropha carboxidovorans RepID=B6JEJ4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06593.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_11
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10054..10890)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JEJ5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06592.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_1960_12
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10874..11128)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JEJ6_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN04487.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCN18_30_10_14_R3_B_scaffold_1960_13
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11517..13265
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYJ7_9BRAD
Site-specific recombinase XerD {ECO:0000313|EMBL:KFC75617.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phage integrase family recombinase
SCN18_30_10_14_R3_B_scaffold_1960_14
unknown

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comp(13322..13729)
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying 14 items

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