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SCN18_30_10_14_R3_B_scaffold_2426

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_2426_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
sucA; 2-oxoglutarate dehydrogenase componentSucA (EC:1.2.4.2)
2-oxoglutarate dehydrogenase componentSucA {ECO:0000313|EMBL:AEI08036.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AEI08036.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
2-oxoglutarate dehydrogenase componentSucA n=2 Tax=Oligotropha carboxidovorans RepID=B6JCZ6_OLICO
SCN18_30_10_14_R3_B_scaffold_2426_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1005..2246
DNA (1242bp) protein (414aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
sucB; dihydrolipoamide succinyltransferase SucB (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX8_9BRAD
SCN18_30_10_14_R3_B_scaffold_2426_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2396..3796
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX9_9BRAD
SCN18_30_10_14_R3_B_scaffold_2426_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4188..4706
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1J1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34604.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2426_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4890..5480)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JD00_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08032.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_2426_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5604..6587)
DNA (984bp) protein (328aa)
Tyrosine recombinase XerC n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGK2_9BRAD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
xerC; tyrosine recombinase XerC
SCN18_30_10_14_R3_B_scaffold_2426_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6675..8846
DNA (2172bp) protein (724aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
priA; primosomal assembly protein PriA (EC:3.6.1.-)
Primosomal protein N n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZG6_9BRAD
SCN18_30_10_14_R3_B_scaffold_2426_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9118..9558)
DNA (441bp) protein (147aa)
Rare lipoprotein A n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY3_9BRAD
rare lipoprotein A family protein
Rare lipoprotein A {ECO:0000313|EMBL:EFI50060.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_30_10_14_R3_B_scaffold_2426_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10149..10751
DNA (603bp) protein (201aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZA1_9BRAD
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying 9 items

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