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SCN18_30_10_14_R3_B_scaffold_2168_13

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 10538..12010

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Afipia birgiae RepID=UPI0002E1B646 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 493.0
  • Bit_score: 772
  • Evalue 2.00e-220
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EGP08906.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 495.0
  • Bit_score: 762
  • Evalue 2.90e-217
DEAD/DEAH box helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 496.0
  • Bit_score: 723
  • Evalue 3.00e-206

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
TTGACCTCTTTTCAGGATTTCGGCCTCGCCGATCCCATTTCGCGTGCCCTCAAGGAAGAAAACTATCACACGCCCACCCCGATCCAGGCCCAGGCGATTCCGATCGTCATCACCGGCCGCGACCTGATCGGCATCGCCCAGACCGGCACCGGCAAGACCGCCTCGTTCGCGCTGCCCATTCTCCACCGCCTGCTCGAGAACCGCACCAAGCCGCAGTCCAAGACCTGCCGCGTGCTGGTGCTGAGCCCGACCCGCGAATTGTCGGGGCAGATTCTCGACAGCTTCAACGCCTATGGCCGCCACATCCGCCTGAGTTCGACCCTTGCCATCGGCGGCGTGCCGATGGGCCGTCAGGTCCGCGCCATGATGCCGGGCGTGGAAGTTCTTGTCGCGACCCCGGGCCGCCTGCTCGACCTCGTGCAGGGCAACGCCCTCAAGCTCAACCAGGTCGAGTTTCTGGTGCTTGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCAACGACATCCGCAAAATCGTCGCCAAGCTGCCCGTGAAACGCCAGACCCTGTTTTTCTCGGCCACCATGCCGAAGGATATCGCCGACCTCGCCGAGCACATGCTGCGCGATCCGGCGCGGGTCGCGGTCACGCCGGTGTCCTCGACGGTGGAGCGCATCACCCAGCGCGTGATCCAGGTCGATCACACCGCCAAGCCCGCGGTGCTCGCCGAACTGTTGCGCAACGAGCCGGTCAACCGCGCGCTGGTGTTCACCCGCACCAAGCACGGCGCCGACAAGGTGGTGAAGGGTCTCGTCAAGGCCGGCATCGCCGCCGAGGCGATCCACGGCAACAAGTCGCAGAACCATCGCGAGCGCGTGCTCGCCGCCTTCCGCAACGGCGACATCCGCACCCTGATCGCGACCGACATCGCCGCCCGCGGCATCGACGTCGACGGCATCACCCATGTCATCAACTTCGATCTCACCAACATCCCCGAGACCTACGTGCATCGCATCGGCCGCACCGCGCGCGCCGGCGCCGACGGCACCGCGATCTCGCTGGTGGCTGGCGAGGAGAACACCTATCTGCGCGACATCGAGAAGCTGATCCGCATCTCGCTGCCACGCGAGGACCGCCGCACGCCGGGCCATGCCCGCGCCGCCGCGCCCGCATCGGCGCCTGCGCAGCAGCGCAGCGCGCGCGGGCCGCACGGTCATCCGGCGCGCGGACAGGACGGCGCTCCTTCCGCCAAGGGACCGCGCCGCCGGCGCCGTCCCGGCGGCGGCGCCGCGCAGGGCCACCGGCACGACAACAACGGCCATGGCGCCAGCCACAATGGCGGCCAGAAAGCCAGCCACGGCCGGCACGAACAGACCCGGACTTCGCAGGGCAAGGCCGACGGAATTTCCGGCGTGGCCTTCCTCCATCGCGAAAGCCGCCATTCACACCCCGTATCGCAACCCAAGCGCAATCAGCGTCCGCAACGCTAA
PROTEIN sequence
Length: 491
LTSFQDFGLADPISRALKEENYHTPTPIQAQAIPIVITGRDLIGIAQTGTGKTASFALPILHRLLENRTKPQSKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRAMMPGVEVLVATPGRLLDLVQGNALKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPVKRQTLFFSATMPKDIADLAEHMLRDPARVAVTPVSSTVERITQRVIQVDHTAKPAVLAELLRNEPVNRALVFTRTKHGADKVVKGLVKAGIAAEAIHGNKSQNHRERVLAAFRNGDIRTLIATDIAARGIDVDGITHVINFDLTNIPETYVHRIGRTARAGADGTAISLVAGEENTYLRDIEKLIRISLPREDRRTPGHARAAAPASAPAQQRSARGPHGHPARGQDGAPSAKGPRRRRRPGGGAAQGHRHDNNGHGASHNGGQKASHGRHEQTRTSQGKADGISGVAFLHRESRHSHPVSQPKRNQRPQR*