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SCN18_30_10_14_R3_B_scaffold_2168

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_2168_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..963
DNA (963bp) protein (321aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
malate synthase G (EC:2.3.3.9)
Malate synthase G n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIX4_9BRAD
SCN18_30_10_14_R3_B_scaffold_2168_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1105..1551)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P021_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34099.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2168_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1718..2089)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NVS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08929.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2168_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2157..3329)
DNA (1173bp) protein (391aa)
permease n=1 Tax=Afipia birgiae RepID=UPI000315AD48
Uncharacterized protein {ECO:0000313|EMBL:EKS30797.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative transmembrane protein
SCN18_30_10_14_R3_B_scaffold_2168_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3521..4333
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031F04E0
Uncharacterized protein {ECO:0000313|EMBL:EKS32612.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2168_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4410..5048
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJA5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05451.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_2168_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5140..5301
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Bradyrhizobiaceae RepID=K8NVT1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08934.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2168_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5505..5927)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P327_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD89553.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_30_10_14_R3_B_scaffold_2168_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6108..6905)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S9_9BRAD
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:CEG06802.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator with C-terminal receiver domain
SCN18_30_10_14_R3_B_scaffold_2168_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..7385
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NYV0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08924.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_2168_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7385..7933
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=2 Tax=Afipia RepID=D6V3T1_9BRAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
RNA polymerase sigma factor
SCN18_30_10_14_R3_B_scaffold_2168_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8162..9733)
DNA (1572bp) protein (524aa)
Signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T2_9BRAD
Signal transduction histidine kinase {ECO:0000313|EMBL:EFI52612.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
signal transduction histidine hinase
SCN18_30_10_14_R3_B_scaffold_2168_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10538..12010
DNA (1473bp) protein (491aa)
RNA helicase n=1 Tax=Afipia birgiae RepID=UPI0002E1B646
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EGP08906.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
DEAD/DEAH box helicase-like protein
SCN18_30_10_14_R3_B_scaffold_2168_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12035..12160
DNA (126bp) protein (42aa)
Translation initiation factor IF-1 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMH1_9BRAD
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying 14 items

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