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SCN18_30_10_14_R3_P_scaffold_2240

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_2240_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..186
DNA (186bp) protein (62aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=EFTU_RHOP5
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_30_10_14_R3_P_scaffold_2240_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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455..1354
DNA (900bp) protein (300aa)
Dihydrodipicolinate synthetase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T998_MESCW
Uncharacterized protein {ECO:0000313|EMBL:KFC63746.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrodipicolinate synthetase
SCN18_30_10_14_R3_P_scaffold_2240_trna_1
unknown

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1437..1509
DNA (73bp)
transferRNA Trp
SCN18_30_10_14_R3_P_scaffold_2240_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1648..1737
DNA (90bp) protein (30aa)
SCN18_30_10_14_R3_P_scaffold_2240_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2040..2234
DNA (195bp) protein (65aa)
preprotein translocase subunit SecE n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036D7F8F
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Preprotein translocase, SecE subunit
SCN18_30_10_14_R3_P_scaffold_2240_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2250..2783
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW92_9RHIZ
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NusG antitermination factor
SCN18_30_10_14_R3_P_scaffold_2240_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3117..3548
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=RL11_METNO
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplK; 50S ribosomal protein L11
SCN18_30_10_14_R3_P_scaffold_2240_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3562..4260
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CGK4_9RHIZ
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplA; ribosomal protein L1
SCN18_30_10_14_R3_P_scaffold_2240_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4806..5321
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003757087
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplJ; 50S ribosomal protein L10
SCN18_30_10_14_R3_P_scaffold_2240_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5373..5750
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=RL7_METRJ
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplL; 50S ribosomal protein L7/L12
SCN18_30_10_14_R3_P_scaffold_2240_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5992..10113
DNA (4122bp) protein (1374aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=151454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea eneae.;"
DNA-directed RNA polymerase subunit beta n=3 Tax=Bosea eneae RepID=Q6XBK9_9BRAD
rpoB; DNA-directed RNA polymerase subunit beta
SCN18_30_10_14_R3_P_scaffold_2240_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10243..11511
DNA (1269bp) protein (423aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1FE48
DNA-directed RNA polymerase subunit beta'
Displaying 12 items

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