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SCN18_30_10_14_R3_P_scaffold_543

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_P_scaffold_543_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
transposase IS3 n=1 Tax=Aureimonas ureilytica RepID=UPI00037DF480
transposase and inactivated derivative
Transposase-like protein {ECO:0000313|EMBL:ABE62010.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R3_P_scaffold_543_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..514)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00036C599F
Uncharacterized protein {ECO:0000313|EMBL:CDX11428.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCN18_30_10_14_R3_P_scaffold_543_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

557..922
DNA (366bp) protein (122aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3T8_POLGS
transposase and inactivated derivatives-like protein
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ADZ68920.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_30_10_14_R3_P_scaffold_543_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(969..1880)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002002920
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:KFC66581.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_543_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2001..2903)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U8T6_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KEQ02298.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
LysR family transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_543_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3024..4019
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE9328
Uncharacterized protein {ECO:0000313|EMBL:ERL49597.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_543_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4028..5566
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AED597
Arylsulfatase {ECO:0000313|EMBL:KHJ55413.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
arylsulfatase
SCN18_30_10_14_R3_P_scaffold_543_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5588..6325)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EC21B5
Aspartate racemase {ECO:0000313|EMBL:KFC71680.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_30_10_14_R3_P_scaffold_543_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6322..7470)
DNA (1149bp) protein (383aa)
Lysine 6-dehydrogenase {ECO:0000313|EMBL:KFC71679.1}; EC=1.4.1.18 {ECO:0000313|EMBL:KFC71679.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000366924A
saccharopine dehydrogenase protein
SCN18_30_10_14_R3_P_scaffold_543_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7463..8272)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000360A2C6
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC71678.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter ATPase
SCN18_30_10_14_R3_P_scaffold_543_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8285..8947)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305DCBB
His/Glu/Gln/Arg/opine family amino ABC transporter permease {ECO:0000313|EMBL:KFC71677.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease
SCN18_30_10_14_R3_P_scaffold_543_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8997..9824)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031FDAEC
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:KFC71676.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein
SCN18_30_10_14_R3_P_scaffold_543_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9951..10859)
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000373C8E9
dapA; Strongly dihydropicolinate synthase (DHDPS)-like protein
SCN18_30_10_14_R3_P_scaffold_543_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10880..12283)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031AA07B
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:KFC71674.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
SCN18_30_10_14_R3_P_scaffold_543_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12287..13633)
DNA (1347bp) protein (449aa)
Opine oxidase subunit A (Octopine oxidase subunit A) {ECO:0000313|EMBL:KFC71673.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71673.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D787A8
BFD/(2Fe-2S)-binding domain-containing protein
SCN18_30_10_14_R3_P_scaffold_543_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13626..13889)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031499BB
Uncharacterized protein {ECO:0000313|EMBL:KFC71672.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ferredoxin
SCN18_30_10_14_R3_P_scaffold_543_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13886..15013)
DNA (1128bp) protein (376aa)
Opine oxidase subunit B (Octopine oxidase subunit B) {ECO:0000313|EMBL:KFC71671.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71671.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003070D33
FAD dependent oxidoreductase
SCN18_30_10_14_R3_P_scaffold_543_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15042..16097
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DCEB20
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC71670.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCN18_30_10_14_R3_P_scaffold_543_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16454..17644
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035C4439
HmuT protein {ECO:0000313|EMBL:KFC72819.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter periplasmic protein
SCN18_30_10_14_R3_P_scaffold_543_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..18678
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036DC0F3
Hemin ABC transporter, permease protein {ECO:0000313|EMBL:KFC72818.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease
SCN18_30_10_14_R3_P_scaffold_543_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18675..19463
DNA (789bp) protein (263aa)
Hemin import ATP-binding protein HmuV {ECO:0000313|EMBL:KFC72817.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC72817.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000363481F
ABC transporter
SCN18_30_10_14_R3_P_scaffold_543_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19460..20116
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036E465D
Uncharacterized protein {ECO:0000313|EMBL:EWY36941.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
methyltransferase type 11
SCN18_30_10_14_R3_P_scaffold_543_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20136..21101)
DNA (966bp) protein (322aa)
Metapyrocatechase catechol 2,3-dioxygenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT71_9RHIZ
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:KFC71631.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Catechol 2,3-dioxygenase
SCN18_30_10_14_R3_P_scaffold_543_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21098..22207)
DNA (1110bp) protein (370aa)
Methionine synthase II (Cobalamin-independent) n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHT8_9BRAD
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:KFC71632.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
SCN18_30_10_14_R3_P_scaffold_543_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22233..22958)
DNA (726bp) protein (242aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFC71633.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC71633.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FB55BA
ABC transporter-like protein
SCN18_30_10_14_R3_P_scaffold_543_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22951..23703)
DNA (753bp) protein (251aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRY6_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC71634.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
SCN18_30_10_14_R3_P_scaffold_543_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23700..24707)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003716A66
Inner-membrane translocator {ECO:0000313|EMBL:KFC71635.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
SCN18_30_10_14_R3_P_scaffold_543_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24704..25561)
DNA (858bp) protein (286aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SQU4_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:KFC71636.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
SCN18_30_10_14_R3_P_scaffold_543_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25596..26771)
DNA (1176bp) protein (392aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127J8_POLSJ
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KFC71637.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular ligand-binding receptor
SCN18_30_10_14_R3_P_scaffold_543_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26827..27516)
DNA (690bp) protein (230aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QAM0_9BRAD
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase {ECO:0000313|EMBL:KFC71638.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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