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SCN18_14_9_16_R2_B_scaffold_715

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_715_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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383..805
DNA (423bp) protein (141aa)
conjugal transfer protein TraI n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003652D90
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ADU42487.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_14_9_16_R2_B_scaffold_715_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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839..1201
DNA (363bp) protein (121aa)
Conjugal transfer protein TrbI n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A766_9SPHN
conjugation TrbI family protein
Conjugal transfer protein TrbI {ECO:0000313|EMBL:GAD50588.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
SCN18_14_9_16_R2_B_scaffold_715_3
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1204..1428
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JSW5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KHJ54599.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
Hypothetical protein
SCN18_14_9_16_R2_B_scaffold_715_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1512..2636)
DNA (1125bp) protein (375aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPV0_SPHAL
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABF54322.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCN18_14_9_16_R2_B_scaffold_715_5
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3551..4807)
DNA (1257bp) protein (419aa)
UPI0003D622F5 related cluster n=1 Tax=unknown RepID=UPI0003D622F5
Integrase {ECO:0000313|EMBL:KIZ39564.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phage integrase
SCN18_14_9_16_R2_B_scaffold_715_6
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5102..6664)
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J1Y9_9RHIZ
guaA; GMP synthase
SCN18_14_9_16_R2_B_scaffold_715_7
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6727..7404)
DNA (678bp) protein (226aa)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:EXL05346.1}; EC=3.2.2.9 {ECO:0000313|EMBL:EXL05346.1};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
S-adenosylhomocysteine nucleosidase n=1 Tax=Ochrobactrum anthropi RepID=UPI000289E437
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
SCN18_14_9_16_R2_B_scaffold_715_8
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7466..7918)
DNA (453bp) protein (151aa)
Thioesterase superfamily protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3G0_OCHA4
thioesterase family protein
Phenylacetic acid degradation protein {ECO:0000313|EMBL:EXL05345.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCN18_14_9_16_R2_B_scaffold_715_9
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7931..9220)
DNA (1290bp) protein (430aa)
Fmu (Sun) domain-containing protein n=1 Tax=Brucella sp. BO2 RepID=E2PKP5_9RHIZ
Fmu (Sun) domain-containing protein {ECO:0000313|EMBL:EFM60456.1}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
fmu domain-containing protein
SCN18_14_9_16_R2_B_scaffold_715_10
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9350..10849)
DNA (1500bp) protein (500aa)
Catalase {ECO:0000313|EMBL:ABS15762.1}; EC=1.11.1.6 {ECO:0000313|EMBL:ABS15762.1};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Catalase n=3 Tax=Ochrobactrum RepID=A6X3F8_OCHA4
catalase
SCN18_14_9_16_R2_B_scaffold_715_11
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11020..11937
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3F7_OCHA4
LysR family transcriptional regulator {ECO:0000313|EMBL:EXL05342.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
LysR family transcriptional regulator
SCN18_14_9_16_R2_B_scaffold_715_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11919..13412)
DNA (1494bp) protein (498aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Ochrobactrum RepID=C4WMN5_9RHIZ
guaB; inosine 5'-monophosphate dehydrogenase
SCN18_14_9_16_R2_B_scaffold_715_13
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13617..14996
DNA (1380bp) protein (460aa)
Chloride channel core n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3F5_OCHA4
chloride channel core
Chloride channel core {ECO:0000313|EMBL:ABS15759.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_14_9_16_R2_B_scaffold_715_14
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15150..16580
DNA (1431bp) protein (477aa)
phosphomannomutase n=1 Tax=Ochrobactrum anthropi RepID=UPI000289F9BB
Phosphomannomutase {ECO:0000313|EMBL:ERI12788.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
phosphoglucomutase/phosphomannomutase subunit alpha/beta
SCN18_14_9_16_R2_B_scaffold_715_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16583..17998
DNA (1416bp) protein (472aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Ochrobactrum anthropi RepID=UPI00028990D1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ELT49823.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCN18_14_9_16_R2_B_scaffold_715_16
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18020..18478)
DNA (459bp) protein (153aa)
UPI0003CDFC26 related cluster n=1 Tax=unknown RepID=UPI0003CDFC26
Manganese transporter {ECO:0000313|EMBL:ESX78795.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
manganese transport regulator MntR
SCN18_14_9_16_R2_B_scaffold_715_17
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18685..20046
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=MNTH_RHILO
manganese transport protein MntH
Divalent metal cation transporter MntH {ECO:0000255|HAMAP-Rule:MF_00221}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_14_9_16_R2_B_scaffold_715_18
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20174..21223
DNA (1050bp) protein (350aa)
dienelactone hydrolase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00038163FB
Dienelactone hydrolase {ECO:0000313|EMBL:EHJ98935.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
dienelactone hydrolase
SCN18_14_9_16_R2_B_scaffold_715_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21186..21812)
DNA (627bp) protein (209aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD51_9RHIZ
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:CCV14108.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_715_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22544..23752)
DNA (1209bp) protein (403aa)
Putative multidrug resistance transporter protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUQ9_9RHIZ
Bcr/CflA subfamily drug resistance transporter
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:CDN49910.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_14_9_16_R2_B_scaffold_715_trna_1
unknown

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comp(24324..24395)
DNA (72bp)
transferRNA Asn
SCN18_14_9_16_R2_B_scaffold_715_21
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24523..24600
DNA (78bp) protein (26aa)
Displaying 22 items

View Taxonomy