ggKbase home page

SCN18_14_9_16_R2_B_scaffold_735

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_735_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
insertion element ISR1 10 kDa protein A3
SCN18_14_9_16_R2_B_scaffold_735_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325..1197)
DNA (873bp) protein (291aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
UPI0003CF4688 related cluster n=1 Tax=unknown RepID=UPI0003CF4688
undecaprenol kinase
SCN18_14_9_16_R2_B_scaffold_735_3
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1445..2329
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH60_9RHIZ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK59781.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_14_9_16_R2_B_scaffold_735_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2396..3133)
DNA (738bp) protein (246aa)
livF; putative ABC transporter ATP-binding protein (EC:3.6.3.27)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003723779
Histidinol dehydrogenase {ECO:0000313|EMBL:EPR10875.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
SCN18_14_9_16_R2_B_scaffold_735_5
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3130..3948)
DNA (819bp) protein (273aa)
livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein (EC:3.6.3.27)
amino acid ABC transporter ATP-binding protein n=1 Tax=Rhizobium radiobacter RepID=UPI000378EAA5
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPR10917.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
SCN18_14_9_16_R2_B_scaffold_735_6
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3945..5249)
DNA (1305bp) protein (435aa)
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI00035D0EF1
ABC transporter permease {ECO:0000313|EMBL:EPR10876.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
livM; High-affinity branched-chain amino acid transport system permease protein livM
SCN18_14_9_16_R2_B_scaffold_735_7
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5268..6185)
DNA (918bp) protein (306aa)
branched-chain amino acid transporter permease subunit LivH n=1 Tax=Rhizobium leguminosarum RepID=UPI00037F5AE2
Branched-chain amino acid transporter permease subunit LivH {ECO:0000313|EMBL:EPR10877.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
livH; High-affinity branched-chain amino acid transport system permease protein livH
SCN18_14_9_16_R2_B_scaffold_735_8
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6258..7373)
DNA (1116bp) protein (372aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C9955
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EPR10878.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
livK; putative branched-chain amino acid ABC transporter
SCN18_14_9_16_R2_B_scaffold_735_9
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7726..8937
DNA (1212bp) protein (404aa)
aatB1; aspartate aminotransferase B (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037236B8
Aspartate aminotransferase B {ECO:0000313|EMBL:KEC79122.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_14_9_16_R2_B_scaffold_735_10
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8952..9764
DNA (813bp) protein (271aa)
NAD-dependent dehydratase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035E3B6E
dTDP-glucose 4,6-dehydratase
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ACP21771.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_14_9_16_R2_B_scaffold_735_11
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9774..10967
DNA (1194bp) protein (398aa)
putative FAD dependent oxidoreductase (EC:1.5.3.1)
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:CCF00918.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CCF00918.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Putative FAD dependent oxidoreductase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIN6_RHIFH
SCN18_14_9_16_R2_B_scaffold_735_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10968..11702)
DNA (735bp) protein (245aa)
Putative GntR family transcriptional regulator n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIN8_RHIFH
putative GntR family transcriptional regulator
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:CCF00920.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCN18_14_9_16_R2_B_scaffold_735_13
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11976..12737
DNA (762bp) protein (254aa)
Putative short-chain type dehydrogenase/reductase y4eL {ECO:0000313|EMBL:EYR79260.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EYR79260.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative short-chain type dehydrogenase/reductase y4eL (EC:1.1.1.100)
Putative short-chain type dehydrogenase/reductase y4eL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXH7_9RHIZ
SCN18_14_9_16_R2_B_scaffold_735_14
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12730..13476
DNA (747bp) protein (249aa)
putative short-chain type dehydrogenase/reductase y4eK (EC:1.-.-.-)
Putative short-chain type dehydrogenase/reductase y4eK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0P1_9RHIZ
Short-chain type dehydrogenase/reductase y4eK {ECO:0000313|EMBL:KEC79129.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_14_9_16_R2_B_scaffold_735_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13480..15144
DNA (1665bp) protein (555aa)
thiamine pyrophosphate protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B3836F
thiamine pyrophosphate TPP-binding domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_14_9_16_R2_B_scaffold_735_16
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15141..17234
DNA (2094bp) protein (698aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7I8_MESCW
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_14_9_16_R2_B_scaffold_735_17
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17231..18853
DNA (1623bp) protein (541aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL36_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_14_9_16_R2_B_scaffold_735_18
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18928..19368)
DNA (441bp) protein (147aa)
Transcriptional regulator, AsnC family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V915_9RHIZ
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ENN89681.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
AsnC family transcriptional regulator
SCN18_14_9_16_R2_B_scaffold_735_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19507..22554
DNA (3048bp) protein (1016aa)
dgdA2; 2,2-dialkylglycine decarboxylase DgdA (EC:4.1.1.64)
4-aminobutyrate aminotransferase family protein n=1 Tax=Pseudomonas sp. GM33 RepID=J3FRJ4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJZ42999.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCN18_14_9_16_R2_B_scaffold_735_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22690..23436)
DNA (747bp) protein (249aa)
Putative oxidoreductase NAD protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UCT3_9RHIZ
Putative oxidoreductase NAD protein {ECO:0000313|EMBL:ENN87963.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
bluB; cob(II)yrinic acid a,c-diamide reductase
Displaying 20 items

View Taxonomy