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SCN18_26_2_15_R1_B_scaffold_4098

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_4098_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..759)
DNA (759bp) protein (253aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:ESR25599.1}; EC=1.2.1.3 {ECO:0000313|EMBL:ESR25599.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036F56C6
aldehyde dehydrogenase
SCN18_26_2_15_R1_B_scaffold_4098_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1078..2154
DNA (1077bp) protein (359aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000382D580
LysR family transcriptional regulator
Transcriptional regulator of molybdate metabolism, LysR family {ECO:0000313|EMBL:ADJ22047.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R1_B_scaffold_4098_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2290..3126)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E32FF
Uncharacterized protein {ECO:0000313|EMBL:EYR77525.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_4098_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3269..4102
DNA (834bp) protein (278aa)
Transcriptional regulator, RpiR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESI9_9RHIZ
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR77526.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_4098_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4102..5445
DNA (1344bp) protein (448aa)
Acetylornithine transaminase {ECO:0000313|EMBL:EYR77527.1}; EC=2.6.1.11 {ECO:0000313|EMBL:EYR77527.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acetylornithine transaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAN2_9RHIZ
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_4098_6
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5463..6263
DNA (801bp) protein (267aa)
Glutamine-binding periplasmic protein GlnH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQH0_9RHIZ
Glutamine-binding periplasmic protein GlnH {ECO:0000313|EMBL:EYR77528.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glnH; glutamine ABC transporter periplasmic protein
SCN18_26_2_15_R1_B_scaffold_4098_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6238..6837
DNA (600bp) protein (200aa)
Possible transposase for insertion sequence element n=2 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YGR8_MOBAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73731.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 7 items

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