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SCN18_26_2_15_R1_B_scaffold_4836

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_4836_1
unknown

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1..498
DNA (498bp) protein (166aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_4836_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(360..3164)
DNA (2805bp) protein (935aa)
conjugal transfer protein TrbA n=1 Tax=Meganema perideroedes RepID=UPI00035DDC19
Conjugal transfer protein TraA {ECO:0000313|EMBL:KGJ12029.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
conjugal transfer relaxase TraA
SCN18_26_2_15_R1_B_scaffold_4836_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3336..3662
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY02_9BRAD
Conjugal transfer protein TraD {ECO:0000313|EMBL:KIZ46658.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
conjugual transfert protein, traC
SCN18_26_2_15_R1_B_scaffold_4836_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3664..3930
DNA (267bp) protein (89aa)
Conjugal transfer TraD n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TVU2_9RHIZ
Conjugal transfer protein TraD {ECO:0000313|EMBL:KIZ46654.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
conjugal transfer TraD family protein
SCN18_26_2_15_R1_B_scaffold_4836_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..4905
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000366C347
AraC family transcriptional regulator {ECO:0000313|EMBL:EXL09407.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
AraC family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_4836_6
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4976..5653
DNA (678bp) protein (226aa)
tRNA synthetase subunit beta n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AAF59E
Uncharacterized protein {ECO:0000313|EMBL:GAL49202.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_4836_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5650..6249
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037A107E
Lysine transporter LysE {ECO:0000313|EMBL:EXL09406.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
RhtB family transporter
SCN18_26_2_15_R1_B_scaffold_4836_8
unknown

Not on your lists

6316..6375
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 8 items

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