ggKbase home page

SCN18_26_2_15_R1_B_scaffold_1144

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1144_1
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(3..1667)
DNA (1665bp) protein (555aa)
Putative molybdopterin oxidoreductase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S40_SYMTH
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCN18_26_2_15_R1_B_scaffold_1144_2
unknown

Not on your lists

comp(1676..2302)
DNA (627bp) protein (209aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2530..3171)
DNA (642bp) protein (214aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_26_2_15_R1_B_scaffold_1144_4
unknown

Not on your lists

3572..3778
DNA (207bp) protein (69aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_5
unknown

Not on your lists

comp(3727..3945)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_6
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4269..4919
DNA (651bp) protein (217aa)
2OG-Fe(II) oxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6Y9_MESOW
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AEH87459.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_26_2_15_R1_B_scaffold_1144_7
unknown

Not on your lists

comp(6444..6956)
DNA (513bp) protein (171aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_8
unknown

Not on your lists

comp(7171..7770)
DNA (600bp) protein (200aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_9
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(7767..8648)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000379D26A
Uncharacterized protein {ECO:0000313|EMBL:KKL86564.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_26_2_15_R1_B_scaffold_1144_10
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8761..9090)
DNA (330bp) protein (110aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J2H9_DEIGD
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
SCN18_26_2_15_R1_B_scaffold_1144_11
unknown

Not on your lists

comp(9087..9476)
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_12
unknown

Not on your lists

comp(9492..9614)
DNA (123bp) protein (41aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_13
unknown

Not on your lists

9798..10061
DNA (264bp) protein (88aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_14
unknown

Not on your lists

10062..10322
DNA (261bp) protein (87aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_15
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10460..11152
DNA (693bp) protein (231aa)
Putative phage repressor n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HBE1_RHIRD
Repressor protein C {ECO:0000313|EMBL:KGE81461.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
C repressor protein
SCN18_26_2_15_R1_B_scaffold_1144_16
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11206..11790
DNA (585bp) protein (195aa)
SCP-like extracellular n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A9M5_METM6
SCP-like extracellular
Allergen V5/Tpx-1 family protein {ECO:0000313|EMBL:ABO34457.1}; Flags: Precursor;; TaxID=402880 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain C5 / ATCC BAA-1333).;"
SCN18_26_2_15_R1_B_scaffold_1144_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11869..12492
DNA (624bp) protein (208aa)
Exopolysaccharide synthesis n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6W7_AZOS1
exopolysaccharide synthesis
Exopolysaccharide synthesis {ECO:0000313|EMBL:BAI76396.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCN18_26_2_15_R1_B_scaffold_1144_18
unknown

Not on your lists

comp(12489..12659)
DNA (171bp) protein (57aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_19
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

12660..14591
DNA (1932bp) protein (644aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000380F019
Uncharacterized protein {ECO:0000313|EMBL:KCZ46603.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
SCN18_26_2_15_R1_B_scaffold_1144_20
unknown

Not on your lists

comp(14602..14751)
DNA (150bp) protein (50aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_21
unknown

Not on your lists

14905..15024
DNA (120bp) protein (40aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_22
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15339
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWM8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R1_B_scaffold_1144_23
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15511..15999)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372ED97
Uncharacterized protein {ECO:0000313|EMBL:CBI00246.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1144_24
unknown

Not on your lists

comp(16029..16475)
DNA (447bp) protein (149aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1144_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16580..17185)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 270 RepID=E3T6U1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_26_2_15_R1_B_scaffold_1144_26
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(17410..18585)
DNA (1176bp) protein (392aa)
Putative peptidase family T4 n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY2_9ZZZZ
peptidase S58 DmpA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
SCN18_26_2_15_R1_B_scaffold_1144_27
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18590..19144)
DNA (555bp) protein (185aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKB6_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EHK58836.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
response regulator receiver protein
SCN18_26_2_15_R1_B_scaffold_1144_28
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19217..20536)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Two-component, sensor histidine protein kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKB7_9RHIZ
two-component, sensor histidine protein kinase
SCN18_26_2_15_R1_B_scaffold_1144_29
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20576..23044)
DNA (2469bp) protein (823aa)
ATP-dependent helicase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E1BA6
ATP-dependent helicase {ECO:0000313|EMBL:ESY04326.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
ATP-dependent helicase HrpB
SCN18_26_2_15_R1_B_scaffold_1144_30
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23383..23538
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EEA506
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV04156.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Displaying items 1-30 of 37 in total

View Taxonomy