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SCN18_26_2_15_R1_B_scaffold_1583

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1583_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..399
DNA (399bp) protein (133aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase, large subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2E1_9RHIZ
Glutamate synthase, large subunit {ECO:0000313|EMBL:EHH14124.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCN18_26_2_15_R1_B_scaffold_1583_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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432..740
DNA (309bp) protein (103aa)
SpoVT/AbrB domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNN1_9RHIZ
SpoVT/AbrB domain-containing protein {ECO:0000313|EMBL:EHK57684.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SpoVT/AbrB domain-containing protein
SCN18_26_2_15_R1_B_scaffold_1583_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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743..1147
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ribonuclease VapC n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNN2_9RHIZ
PilT protein domain-containing protein
SCN18_26_2_15_R1_B_scaffold_1583_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1177..2631
DNA (1455bp) protein (485aa)
Glutamate synthase subunit beta {ECO:0000313|EMBL:EKF17005.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EKF17005.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Glutamate synthase subunit beta n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7L1_9RHIZ
glutamate synthase NADH/NADPH small subunit
SCN18_26_2_15_R1_B_scaffold_1583_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2634..3854)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369974F
Uncharacterized protein {ECO:0000313|EMBL:ESX23807.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3867..5093)
DNA (1227bp) protein (409aa)
Lytic murein transglycosylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNN5_9RHIZ
Lytic murein transglycosylase {ECO:0000313|EMBL:EHK57688.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
lytic murein transglycosylase
SCN18_26_2_15_R1_B_scaffold_1583_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..6207
DNA (900bp) protein (300aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Glucose-1-phosphate uridylyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMY0_9RHIZ
UTP-glucose-1-phosphate uridylyltransferase
SCN18_26_2_15_R1_B_scaffold_1583_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6274..6597)
DNA (324bp) protein (108aa)
UPI0003CF6807 related cluster n=1 Tax=unknown RepID=UPI0003CF6807
Uncharacterized protein {ECO:0000313|EMBL:ESZ15837.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6611..8035)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIU4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16083.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8176..9174
DNA (999bp) protein (333aa)
UPI0003CE7E73 related cluster n=1 Tax=unknown RepID=UPI0003CE7E73
KpsF/GutQ {ECO:0000313|EMBL:ESY88525.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9182..9655)
DNA (474bp) protein (158aa)
UPI0003CE41F0 related cluster n=1 Tax=unknown RepID=UPI0003CE41F0
Membrane protein {ECO:0000313|EMBL:ESW90009.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9705..10661)
DNA (957bp) protein (319aa)
SPFH domain, Band 7 family protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ER3_MESSB
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ABG64112.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_26_2_15_R1_B_scaffold_1583_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10757..11959)
DNA (1203bp) protein (401aa)
FAD dependent oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00037AB3A0
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:AID32335.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
FAD dependent oxidoreductase
SCN18_26_2_15_R1_B_scaffold_1583_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12032..13081)
DNA (1050bp) protein (350aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003CFA6E5 related cluster n=1 Tax=unknown RepID=UPI0003CFA6E5
ferrochelatase
SCN18_26_2_15_R1_B_scaffold_1583_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13182..15200)
DNA (2019bp) protein (673aa)
5'-nucleotidase domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2D1_9RHIZ
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:EHH14114.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase
SCN18_26_2_15_R1_B_scaffold_1583_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15311..15697)
DNA (387bp) protein (129aa)
Outer membrane lipoprotein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MYR8_9RHIZ
Outer membrane lipoprotein {ECO:0000313|EMBL:EKF17108.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
outer membrane lipoprotein
SCN18_26_2_15_R1_B_scaffold_1583_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..17224)
DNA (1446bp) protein (482aa)
Homospermidine synthase (EC:2.5.1.44)
UPI0003CE1485 related cluster n=1 Tax=unknown RepID=UPI0003CE1485
Homospermidine synthase {ECO:0000313|EMBL:ESW90013.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCN18_26_2_15_R1_B_scaffold_1583_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17345..18259)
DNA (915bp) protein (305aa)
UPI0003CF3C79 related cluster n=1 Tax=unknown RepID=UPI0003CF3C79
Uncharacterized protein {ECO:0000313|EMBL:ESX13544.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18370..18723)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00036461AD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHP91164.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
SCN18_26_2_15_R1_B_scaffold_1583_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18723..19019)
DNA (297bp) protein (99aa)
DNA polymerase beta domain protein region n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZHG0_METPB
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ACB79896.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCN18_26_2_15_R1_B_scaffold_1583_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19073..19735)
DNA (663bp) protein (221aa)
Mlr3007 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H69_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX11339.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCN18_26_2_15_R1_B_scaffold_1583_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19684..20826)
DNA (1143bp) protein (381aa)
Aminodeoxychorismate synthase {ECO:0000313|EMBL:ESY96311.1}; EC=2.6.1.85 {ECO:0000313|EMBL:ESY96311.1};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CEA773 related cluster n=1 Tax=unknown RepID=UPI0003CEA773
aminodeoxychorismate synthase, component I
SCN18_26_2_15_R1_B_scaffold_1583_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20914..22755)
DNA (1842bp) protein (614aa)
Oligoendopeptidase, pepF/M3 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIP4_MESAW
oligoendopeptidase, pepF/M3 family
Oligoendopeptidase F {ECO:0000313|EMBL:ESY88537.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCN18_26_2_15_R1_B_scaffold_1583_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22917..24419
DNA (1503bp) protein (501aa)
Fis family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFN5_9RHIZ
Fis family transcriptional regulator {ECO:0000313|EMBL:ESX72391.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
response regulatory protein
SCN18_26_2_15_R1_B_scaffold_1583_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24567..26366
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F9F3B0
Peptidase M15 {ECO:0000313|EMBL:ESW90023.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1583_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26425..27003)
DNA (579bp) protein (193aa)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:EHK57712.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EHK57712.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNQ9_9RHIZ
Displaying 26 items

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