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SCN18_26_2_15_R1_B_scaffold_1949

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1949_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1028..1357
DNA (330bp) protein (110aa)
UPI0003D59198 related cluster n=1 Tax=unknown RepID=UPI0003D59198
Uncharacterized protein {ECO:0000313|EMBL:ETI60077.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1949_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..2124
DNA (771bp) protein (257aa)
UPI0003D666F7 related cluster n=1 Tax=unknown RepID=UPI0003D666F7
Membrane protein {ECO:0000313|EMBL:ETI60076.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
glutaredoxin
SCN18_26_2_15_R1_B_scaffold_1949_3
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..2757
DNA (567bp) protein (189aa)
UPI0003D64498 related cluster n=1 Tax=unknown RepID=UPI0003D64498
Uncharacterized protein {ECO:0000313|EMBL:ETI60075.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1949_4
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3109..3306)
DNA (198bp) protein (66aa)
Heavy metal transport/detoxification protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG4_MESSB
Heavy-metal-associated domain-containing protein {ECO:0000313|EMBL:ETR79345.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
heavy metal transport/detoxification protein
SCN18_26_2_15_R1_B_scaffold_1949_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3462..3971
DNA (510bp) protein (170aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N264_9RHIZ
ATPase {ECO:0000313|EMBL:ETR79346.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
heavy metal translocating P-type ATPase
SCN18_26_2_15_R1_B_scaffold_1949_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3913..5976
DNA (2064bp) protein (688aa)
Heavy metal translocating P-type ATPase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG5_MESSB
ATPase {ECO:0000313|EMBL:ETR79346.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
heavy metal translocating P-type ATPase
SCN18_26_2_15_R1_B_scaffold_1949_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5973..6410
DNA (438bp) protein (146aa)
Transcriptional regulator, MerR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG6_MESSB
Transcriptional regulator {ECO:0000313|EMBL:ETR79347.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
MerR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_1949_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..6901
DNA (453bp) protein (151aa)
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG7_MESSB
CopG family transcriptional regulator {ECO:0000313|EMBL:EZQ16409.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
twin-arginine translocation pathway signal
SCN18_26_2_15_R1_B_scaffold_1949_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7011..7214
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5D5_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:CDN95850.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1949_10
SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7272..8966
DNA (1695bp) protein (565aa)
Phosphorylase {ECO:0000313|EMBL:CDN95851.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CDN95851.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Phosphorylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG8_MESSB
alpha-glucan phosphorylase
SCN18_26_2_15_R1_B_scaffold_1949_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8981..9634
DNA (654bp) protein (218aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BG9_MESSB
signal-transduction protein
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ABG65256.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_26_2_15_R1_B_scaffold_1949_12
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9631..10641
DNA (1011bp) protein (337aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH0_MESSB
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABG65255.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_26_2_15_R1_B_scaffold_1949_13
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

10643..11311
DNA (669bp) protein (223aa)
Membrane protein, putative n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH1_MESSB
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABG65254.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_26_2_15_R1_B_scaffold_1949_14
scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, scnpilot_dereplicated_Plasmid_Thiobacillus_1, Plasmid-like

Not on your lists

comp(11324..12922)
DNA (1599bp) protein (533aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
2-octaprenylphenol hydroxylase {ECO:0000313|EMBL:ABG65252.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABG65252.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
2-octaprenylphenol hydroxylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH3_MESSB
SCN18_26_2_15_R1_B_scaffold_1949_15
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12963..14003)
DNA (1041bp) protein (347aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABG65251.1}; EC=1.2.1.12 {ECO:0000313|EMBL:ABG65251.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH4_MESSB
SCN18_26_2_15_R1_B_scaffold_1949_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14276..15760)
DNA (1485bp) protein (495aa)
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH6_MESSB
Copper oxidase {ECO:0000313|EMBL:ETR79388.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
twin-arginine translocation pathway signal
SCN18_26_2_15_R1_B_scaffold_1949_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16235)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:ETR79389.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_26_2_15_R1_B_scaffold_1949_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16365..17642)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000373A7E0
Membrane protein {ECO:0000313|EMBL:ETR79390.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1949_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17686..18138)
DNA (453bp) protein (151aa)
Cytochrome B561 n=1 Tax=Rhizobium sp. CF142 RepID=J1T4L7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETR79391.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
cytochrome B561 protein
SCN18_26_2_15_R1_B_scaffold_1949_20
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

comp(18207..19733)
DNA (1527bp) protein (509aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=TYPH_MESSB
SCN18_26_2_15_R1_B_scaffold_1949_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19730..19834)
DNA (105bp) protein (35aa)
Beta-lactamase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BH9_MESSB
Beta-Casp domain-containing protein {ECO:0000313|EMBL:ETR79393.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
beta-lactamase-like protein
Displaying 21 items

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