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SCN18_26_2_15_R1_B_scaffold_2210

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_2210_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..228
DNA (228bp) protein (76aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8728D
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58344.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_2210_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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377..1495
DNA (1119bp) protein (373aa)
Putative solute-binding component of ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLT5_9RHIZ
Leucine transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX25298.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
extracellular ligand-binding receptor
SCN18_26_2_15_R1_B_scaffold_2210_3
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1672..4860
DNA (3189bp) protein (1063aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
pyruvate carboxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI000362929C
pyruvate carboxylase
SCN18_26_2_15_R1_B_scaffold_2210_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5099..5974)
DNA (876bp) protein (292aa)
SCN18_26_2_15_R1_B_scaffold_2210_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6161..7330
DNA (1170bp) protein (390aa)
UPI0003CE3F1E related cluster n=1 Tax=unknown RepID=UPI0003CE3F1E
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCV11028.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
fucose permease
SCN18_26_2_15_R1_B_scaffold_2210_6
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7355..7513)
DNA (159bp) protein (53aa)
UPI0003CFE1BB related cluster n=1 Tax=unknown RepID=UPI0003CFE1BB
Uncharacterized protein {ECO:0000313|EMBL:ESZ21839.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Protein of unknown function (DUF3309)
SCN18_26_2_15_R1_B_scaffold_2210_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7660..10842)
DNA (3183bp) protein (1061aa)
Acriflavin resistance protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLT1_9RHIZ
Acriflavin resistance protein {ECO:0000313|EMBL:EHK58339.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cation/multidrug efflux pump
SCN18_26_2_15_R1_B_scaffold_2210_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10863..12005)
DNA (1143bp) protein (381aa)
UPI0003CFE09D related cluster n=1 Tax=unknown RepID=UPI0003CFE09D
Hemolysin D {ECO:0000313|EMBL:ESZ40978.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
RND family efflux transporter MFP subunit
SCN18_26_2_15_R1_B_scaffold_2210_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12073..12891
DNA (819bp) protein (273aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TN52_MESCW
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADV10495.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_B_scaffold_2210_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13135..13719)
DNA (585bp) protein (195aa)
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCN18_26_2_15_R1_B_scaffold_2210_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13902..15152
DNA (1251bp) protein (417aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDU5_9RHIZ
SCN18_26_2_15_R1_B_scaffold_2210_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15254..16126
DNA (873bp) protein (291aa)
UPI0003CF9AA4 related cluster n=1 Tax=unknown RepID=UPI0003CF9AA4
Lytic transglycosylase {ECO:0000313|EMBL:ESW81047.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
soluble lytic murein transglycosylase-like protein
SCN18_26_2_15_R1_B_scaffold_2210_13
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16139..17056)
DNA (918bp) protein (306aa)
UPI0003CE194A related cluster n=1 Tax=unknown RepID=UPI0003CE194A
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ESX69626.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
polyprenyl synthetase
SCN18_26_2_15_R1_B_scaffold_2210_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17133..17885
DNA (753bp) protein (251aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EL59_9RHIZ
Transglycosylase
SCN18_26_2_15_R1_B_scaffold_2210_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18022..18204
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=3 Tax=Mesorhizobium RepID=G6YDU4_9RHIZ
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
50S ribosomal protein L32
SCN18_26_2_15_R1_B_scaffold_2210_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18359..18760
DNA (402bp) protein (134aa)
Transcriptional regulator, putative n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F32_RHILO
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AID33070.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_2210_17
unknown

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19248..19307
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 17 items

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