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SCN18_26_2_15_R1_B_scaffold_683

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_683_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..724
DNA (723bp) protein (241aa)
Mlr2338 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98IM4_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX15309.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

751..1197
DNA (447bp) protein (149aa)
Type VI secretion protein n=5 Tax=Mesorhizobium RepID=V7EX48_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESX52244.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
type VI secretion system effector, hcp1 family
SCN18_26_2_15_R1_B_scaffold_683_3
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1184..1933
DNA (750bp) protein (250aa)
Type VI secretion protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G037_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:ESY17453.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
type VI secretion system lysozyme-related protein
SCN18_26_2_15_R1_B_scaffold_683_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1936..3810
DNA (1875bp) protein (625aa)
UPI0003CF66EA related cluster n=1 Tax=unknown RepID=UPI0003CF66EA
Type VI secretion protein {ECO:0000313|EMBL:ESY26126.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
type VI secretion protein, vc_a0110 family
SCN18_26_2_15_R1_B_scaffold_683_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3774..4877
DNA (1104bp) protein (368aa)
Type VI secretion protein, vc_a0111 family n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGF1_9RHIZ
Type VI secretion protein, vc_a0111 family {ECO:0000313|EMBL:EHH09173.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
type VI secretion protein, vc_a0111 family
SCN18_26_2_15_R1_B_scaffold_683_6
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4874..6373
DNA (1500bp) protein (500aa)
UPI0003CDE0D5 related cluster n=1 Tax=unknown RepID=UPI0003CDE0D5
Uncharacterized protein {ECO:0000313|EMBL:CDX15299.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6379..6828
DNA (450bp) protein (150aa)
UPI0003CFBD32 related cluster n=1 Tax=unknown RepID=UPI0003CFBD32
Type VI secretion protein {ECO:0000313|EMBL:ESZ30352.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
type VI secretion lipoprotein, vc_a0113 family
SCN18_26_2_15_R1_B_scaffold_683_8
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6860..8194
DNA (1335bp) protein (445aa)
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382E92E
Uncharacterized protein {ECO:0000313|EMBL:CDX15294.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
type VI secretion protein, vc_a0114 family
SCN18_26_2_15_R1_B_scaffold_683_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8199..9530
DNA (1332bp) protein (444aa)
Type IV / vi secretion system protein, dotu family n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGE7_9RHIZ
Type IV / vi secretion system protein, dotu family {ECO:0000313|EMBL:EHH09169.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9532..10578
DNA (1047bp) protein (349aa)
UPI0003CF61E1 related cluster n=1 Tax=unknown RepID=UPI0003CF61E1
Type VI secretion protein VasK {ECO:0000313|EMBL:ESY73594.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
type VI secretion protein icmf
SCN18_26_2_15_R1_B_scaffold_683_11
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10594..13080
DNA (2487bp) protein (829aa)
UPI0003CE0ADF related cluster n=1 Tax=unknown RepID=UPI0003CE0ADF
Type VI secretion protein VasK {ECO:0000313|EMBL:ESW80697.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_12
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13077..13622
DNA (546bp) protein (182aa)
UPI0003D06B59 related cluster n=1 Tax=unknown RepID=UPI0003D06B59
Type VI secretion protein {ECO:0000313|EMBL:ESZ14339.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13613..14701
DNA (1089bp) protein (363aa)
UPI0003CF2E50 related cluster n=1 Tax=unknown RepID=UPI0003CF2E50
Uncharacterized protein {ECO:0000313|EMBL:ESX87337.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_14
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14698..15705
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FX42_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY17464.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
3-oxoacyl-(acyl carrier protein) synthase
SCN18_26_2_15_R1_B_scaffold_683_15
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15716..16744
DNA (1029bp) protein (343aa)
UPI0003CE04A6 related cluster n=1 Tax=unknown RepID=UPI0003CE04A6
Uncharacterized protein {ECO:0000313|EMBL:ESX87335.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_16
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16741..17583
DNA (843bp) protein (281aa)
UPI0003CE2E45 related cluster n=1 Tax=unknown RepID=UPI0003CE2E45
Uncharacterized protein {ECO:0000313|EMBL:ESX87334.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17620..18678)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G052_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY17468.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_18
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18684..19115)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FX47_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY17469.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_19
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19124..21454)
DNA (2331bp) protein (777aa)
UPI0003CF9BB9 related cluster n=1 Tax=unknown RepID=UPI0003CF9BB9
Type IV secretion protein Rhs {ECO:0000313|EMBL:ESX87331.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_20
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21629..22636
DNA (1008bp) protein (336aa)
UPI0003CE628F related cluster n=1 Tax=unknown RepID=UPI0003CE628F
Type VI secretion protein {ECO:0000313|EMBL:ESY37239.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22742..24001
DNA (1260bp) protein (420aa)
Putative mannose-6-phosphate isomerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2Y4_9RHIZ
Putative mannose-6-phosphate isomerase {ECO:0000313|EMBL:EYR77469.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_683_22
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24101..24847
DNA (747bp) protein (249aa)
UPI0003D011DE related cluster n=1 Tax=unknown RepID=UPI0003D011DE
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KFL32908.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R1_B_scaffold_683_23
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25485..26225
DNA (741bp) protein (247aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZJ9_RHOP2
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC61572.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
GntR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_683_24
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26242..28308
DNA (2067bp) protein (689aa)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9M1_9SPHN
5-oxoprolinase {ECO:0000313|EMBL:GAN77426.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hydantoinase A/oxoprolinase protein
SCN18_26_2_15_R1_B_scaffold_683_25
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28338..30131
DNA (1794bp) protein (598aa)
Hydantoinase B/oxoprolinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9M2_9SPHN
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:EGD58720.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hydantoinase B/oxoprolinase protein
SCN18_26_2_15_R1_B_scaffold_683_26
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30193..31572
DNA (1380bp) protein (460aa)
aminotransferase (EC:2.6.1.-)
aminotransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3AC2D
Aminotransferase {ECO:0000313|EMBL:EWY37755.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCN18_26_2_15_R1_B_scaffold_683_27
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31575..32642
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C9C8F
Uncharacterized protein {ECO:0000313|EMBL:EWY38283.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
malate/L-lactate dehydrogenase
SCN18_26_2_15_R1_B_scaffold_683_28
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32682..33407)
DNA (726bp) protein (242aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3F5_RHIFR
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:EYR84563.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
livF3; high-affinity branched-chain amino acid transport ATP-binding protein LivF
SCN18_26_2_15_R1_B_scaffold_683_29
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33571..34776
DNA (1206bp) protein (402aa)
Extracellular ligand-binding receptor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0B7_9RHIZ
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EYR84564.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
extracellular ligand-binding receptor
SCN18_26_2_15_R1_B_scaffold_683_30
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34789..35637
DNA (849bp) protein (283aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRC1_9RHIZ
High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:EYR84565.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
livG3; high-affinity branched-chain amino acid transport ATP-binding protein LivG
Displaying items 1-30 of 43 in total

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