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SCN18_26_2_15_R1_B_scaffold_830

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_830_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(58..1311)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHZ3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH07230.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_830_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1404..2375)
DNA (972bp) protein (324aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00035C35CD
LysR substrate-binding protein {ECO:0000313|EMBL:CDX24142.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_830_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2518..4032
DNA (1515bp) protein (505aa)
Probable cytosol aminopeptidase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9W9_MESCW
peptidase M17 leucyl aminopeptidase domain-containing protein
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_B_scaffold_830_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4082..4984
DNA (903bp) protein (301aa)
L-amino acid amidase {ECO:0000313|EMBL:CDX14525.1}; EC=3.5.1.101 {ECO:0000313|EMBL:CDX14525.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
proline-specific peptidase (EC:3.4.11.5)
PREDICTED: uncharacterized protein LOC102335720 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C181A9
SCN18_26_2_15_R1_B_scaffold_830_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5002..6669
DNA (1668bp) protein (556aa)
Mll0599 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MF6_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX26625.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_830_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6780..7709
DNA (930bp) protein (310aa)
peptide ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00036E5CB9
peptide ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AID30117.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCN18_26_2_15_R1_B_scaffold_830_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7709..8680
DNA (972bp) protein (324aa)
UPI0003CF9624 related cluster n=1 Tax=unknown RepID=UPI0003CF9624
Peptide ABC transporter permease {ECO:0000313|EMBL:ESY80875.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
binding-protein-dependent transport systems inner membrane component
SCN18_26_2_15_R1_B_scaffold_830_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8677..9636
DNA (960bp) protein (320aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9W4_MESCW
oligopeptide/dipeptide ABC transporter ATPase
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ21735.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCN18_26_2_15_R1_B_scaffold_830_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9633..10646
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9K5_MESOW
Oligopeptide transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX14537.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
peptide ABC transporter ATPase
SCN18_26_2_15_R1_B_scaffold_830_10
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..11954)
DNA (1284bp) protein (428aa)
cytosine deaminase (EC:3.5.4.1)
cytosine deaminase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035D2A76
Tax=BJP_IG2158_Rhodobacterales_69_12
SCN18_26_2_15_R1_B_scaffold_830_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12184..14142)
DNA (1959bp) protein (653aa)
oxidoreductase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000375C3EE
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACA18234.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_26_2_15_R1_B_scaffold_830_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14139..14981)
DNA (843bp) protein (281aa)
Enoyl-CoA hydratase n=1 Tax=Roseovarius sp. 217 RepID=A3W3C7_9RHOB
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJS42977.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
Enoyl-CoA hydratase/isomerase
SCN18_26_2_15_R1_B_scaffold_830_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15054..16115)
DNA (1062bp) protein (354aa)
ABC transporter, substrate binding protein (Polyamine) n=1 Tax=Roseovarius sp. 217 RepID=A3W3C8_9RHOB
Polyamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS42978.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
extracellular solute-binding protein
SCN18_26_2_15_R1_B_scaffold_830_14
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16142..17230)
DNA (1089bp) protein (363aa)
ABC polyamine/opine transporter, ATPase subunit n=1 Tax=Roseovarius sp. 217 RepID=A3W3C9_9RHOB
ABC polyamine/opine transporter, ATPase subunit {ECO:0000313|EMBL:EAQ24718.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
spermidine/putrescine ABC transporter ATPase
SCN18_26_2_15_R1_B_scaffold_830_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17227..18039)
DNA (813bp) protein (271aa)
ABC transporter permease protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3D0_9RHOB
ABC transporter permease {ECO:0000313|EMBL:KJS42980.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
binding-protein-dependent transport system inner membrane protein
SCN18_26_2_15_R1_B_scaffold_830_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18036..18920)
DNA (885bp) protein (295aa)
Hypothetical polyamine ABC transporter, permease protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3D1_9RHOB
Hypothetical polyamine ABC transporter, permease protein {ECO:0000313|EMBL:EAQ24720.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
binding-protein-dependent transport system inner membrane protein
SCN18_26_2_15_R1_B_scaffold_830_17
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18917..20089)
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase n=1 Tax=Roseovarius sp. 217 RepID=A3W3D2_9RHOB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EAQ24721.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_830_18
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20086..22239)
DNA (2154bp) protein (718aa)
Acetyl-CoA synthetase, putative n=1 Tax=Roseovarius sp. 217 RepID=A3W3D3_9RHOB
Acetyl-CoA synthetase, putative {ECO:0000313|EMBL:EAQ24722.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
acetyl-CoA synthetase
SCN18_26_2_15_R1_B_scaffold_830_19
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22392..23303
DNA (912bp) protein (304aa)
Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3D4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS43001.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
LysR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_830_20
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23349..25019)
DNA (1671bp) protein (557aa)
Uncharacterized conserved protein UCP007542 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCX6_9RHIZ
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
SCN18_26_2_15_R1_B_scaffold_830_21
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25019..26479)
DNA (1461bp) protein (487aa)
Amidohydrolase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSA5_THISH
amidohydrolase
Tax=BJP_IG2158_Rhodobacterales_69_12
SCN18_26_2_15_R1_B_scaffold_830_22
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26787..27722
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003760430
Uncharacterized protein {ECO:0000313|EMBL:KGD95144.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_830_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27766..28821
DNA (1056bp) protein (352aa)
Penicillin amidase, cysteine peptidase, MEROPS family C59 {ECO:0000313|EMBL:EYR77352.1}; EC=3.5.1.11 {ECO:0000313|EMBL:EYR77352.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Penicillin amidase, Cysteine peptidase, MEROPS family C59 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B0H8_PARDP
choloylglycine hydrolase
SCN18_26_2_15_R1_B_scaffold_830_24
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29187..30842
DNA (1656bp) protein (552aa)
Cytochrome cd1 nitrite reductase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4R7_POLGS
nirS; cytochrome cd1 nitrite reductase
Cytochrome cd1 nitrite reductase {ECO:0000313|EMBL:ADZ69009.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_26_2_15_R1_B_scaffold_830_25
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30939..33092
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIH3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49860.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R1_B_scaffold_830_26
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33406..35103)
DNA (1698bp) protein (566aa)
Recombinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AY78_PARDP
recombinase
Recombinase {ECO:0000313|EMBL:ABL68222.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCN18_26_2_15_R1_B_scaffold_830_27
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35133..35543)
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ribonuclease n=1 Tax=Rhizobium meliloti RepID=UPI00036796CE
PIN domain protein
SCN18_26_2_15_R1_B_scaffold_830_28
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(35543..35815)
DNA (273bp) protein (91aa)
antitoxin n=1 Tax=Rhizobium meliloti RepID=UPI00035E65AD
hypothetical protein
Rv0623 family protein transcription factor {ECO:0000313|EMBL:ABS13361.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_26_2_15_R1_B_scaffold_830_29
CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, Mobile_element

Not on your lists

comp(35893..36150)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F945_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN78241.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_830_30
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36140..36367)
DNA (228bp) protein (76aa)
excisionase n=1 Tax=Meganema perideroedes RepID=UPI00035DF805
DNA-binding protein {ECO:0000313|EMBL:KIZ47277.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phage transcriptional regulator AlpA
Displaying items 1-30 of 32 in total

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