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SCN18_26_2_15_R1_B_scaffold_1783

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1783_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..725)
DNA (723bp) protein (241aa)
gyaR; Glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase {ECO:0000313|EMBL:CAM75169.1}; EC=1.1.1.26 {ECO:0000313|EMBL:CAM75169.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Glyoxylate reductase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX12_9PROT
SCN18_26_2_15_R1_B_scaffold_1783_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1360..2883
DNA (1524bp) protein (508aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSQ3_PARL1
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS62936.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_26_2_15_R1_B_scaffold_1783_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2896..4494)
DNA (1599bp) protein (533aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=PUR9_PARL1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
SCN18_26_2_15_R1_B_scaffold_1783_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4528..4728)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYA7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ70787.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCN18_26_2_15_R1_B_scaffold_1783_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4752..6026)
DNA (1275bp) protein (425aa)
Adenosylmethionine--8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:EHK63052.1}; EC=2.6.1.62 {ECO:0000313|EMBL:EHK63052.1};; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
Adenosylmethionine--8-amino-7-oxononanoate transaminase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEU4_9BURK
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
SCN18_26_2_15_R1_B_scaffold_1783_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..7016)
DNA (975bp) protein (325aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Biotin synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHU7_9RHOB
biotin synthase
SCN18_26_2_15_R1_B_scaffold_1783_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7088..8248
DNA (1161bp) protein (387aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000373DB95
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EJW11656.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCN18_26_2_15_R1_B_scaffold_1783_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8245..8922
DNA (678bp) protein (226aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003808303
dethiobiotin synthase
SCN18_26_2_15_R1_B_scaffold_1783_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9004..9369
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDN2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB48638.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R1_B_scaffold_1783_trna_1
unknown

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9720..9803
DNA (84bp)
transferRNA Leu
SCN18_26_2_15_R1_B_scaffold_1783_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9867..12302)
DNA (2436bp) protein (812aa)
Cation-transporting ATPase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2F7_METPS
cation-transporting ATPase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_B_scaffold_1783_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12530..13474)
DNA (945bp) protein (315aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Isoprenyl transferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHV6_9RHIZ
undecaprenyl diphosphate synthase
SCN18_26_2_15_R1_B_scaffold_1783_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13486..16653)
DNA (3168bp) protein (1056aa)
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P4_9BRAD
Acriflavin resistance protein {ECO:0000313|EMBL:EFI52924.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
multidrug ABC transporter
SCN18_26_2_15_R1_B_scaffold_1783_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16657..17784)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBV1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59747.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R1_B_scaffold_1783_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17785..18975)
DNA (1191bp) protein (397aa)
Outer membrane protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9P9_9RHIZ
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGK59748.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 15 items

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