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SCN18_26_2_15_R1_B_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_238_1
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..639
DNA (639bp) protein (213aa)
SMC domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQ85_GEOS8
Putative ATPase {ECO:0000313|EMBL:CEG06919.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SMC domain-containing protein
SCN18_26_2_15_R1_B_scaffold_238_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..2004
DNA (1350bp) protein (450aa)
Metallophosphoesterase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLD7_9GAMM
Metallophosphoesterase {ECO:0000313|EMBL:EAR23125.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
metallophosphoesterase
SCN18_26_2_15_R1_B_scaffold_238_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2008..5553
DNA (3546bp) protein (1182aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLD8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23126.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_238_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5607..11459)
DNA (5853bp) protein (1951aa)
DNA helicase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002898961
DNA helicase related protein {ECO:0000313|EMBL:GAO54977.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DNA helicase
SCN18_26_2_15_R1_B_scaffold_238_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12323..13432)
DNA (1110bp) protein (370aa)
Recombinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP56_NITHX
hypothetical protein
Recombinase {ECO:0000313|EMBL:ABE61991.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_26_2_15_R1_B_scaffold_238_6
unknown

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13902..14180
DNA (279bp) protein (93aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_238_7
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14206..14973
DNA (768bp) protein (256aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTV5_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KCZ48080.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
slmA; transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_238_8
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15074..16375
DNA (1302bp) protein (434aa)
Sugar and other transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV22_BREDI
Sugar and other transporter family protein {ECO:0000313|EMBL:EGF96451.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
sugar and other transporter family protein
SCN18_26_2_15_R1_B_scaffold_238_9
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..17272
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL8_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_26_2_15_R1_B_scaffold_238_10
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17423..20062
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YP28_9ALTE
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AIF98745.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas australica.;"
SCN18_26_2_15_R1_B_scaffold_238_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20128..20643
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUC4_RHITR
Phosphoserine aminotransferase {ECO:0000313|EMBL:GAN77007.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_238_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20662..21417
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Serratia sp. M24T3 RepID=I0QWL8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJS09613.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
NIPSNAP family protein
SCN18_26_2_15_R1_B_scaffold_238_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21414..22136
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSI8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM26930.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
NIPSNAP family protein
SCN18_26_2_15_R1_B_scaffold_238_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22145..22543
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ47946.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_238_15
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22571..23455
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL8_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_26_2_15_R1_B_scaffold_238_16
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23802..24692)
DNA (891bp) protein (297aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2H0_SPHJU
mmcH; protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin {ECO:0000313|EMBL:BAI96802.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_26_2_15_R1_B_scaffold_238_17
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24885..27488
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HHA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KJS04327.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
TonB-dependent receptor
SCN18_26_2_15_R1_B_scaffold_238_18
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27472..27918
DNA (447bp) protein (149aa)
SCN18_26_2_15_R1_B_scaffold_238_19
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27908..28510)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000369AEA8
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX62133.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_238_20
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28643..30109
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003748A7F
Uncharacterized protein {ECO:0000313|EMBL:ELR66468.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_238_21
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30281..30661
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7V5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59270.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
17 kDa surface antigen
SCN18_26_2_15_R1_B_scaffold_238_22
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30917..33163)
DNA (2247bp) protein (749aa)
TonB-denpendent receptor n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E952
TonB-dependent receptor {ECO:0000313|EMBL:KDA01529.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
TonB-dependent receptor
SCN18_26_2_15_R1_B_scaffold_238_23
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33320..34573
DNA (1254bp) protein (418aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2HFQ2_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:EJL34448.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
TetR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_238_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34762..38037)
DNA (3276bp) protein (1092aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCE4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57774.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
putative uncharacterized protein
SCN18_26_2_15_R1_B_scaffold_238_25
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38244..39398
DNA (1155bp) protein (385aa)
NADH:flavin oxidoreductase n=1 Tax=Nevskia ramosa RepID=UPI0003B4192C
NemA protein {ECO:0000313|EMBL:BAQ47558.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
NADH:flavin oxidoreductase
SCN18_26_2_15_R1_B_scaffold_238_26
SCN_Thiobacillus_53x, SCN_Thiobacillus_53x, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39512..40183
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D635_9BURK
Putative membrane protein {ECO:0000313|EMBL:KFC61515.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_238_27
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40370..41866
DNA (1497bp) protein (499aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
katA; catalase (EC:1.11.1.6)
Catalase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMU1_9BURK
SCN18_26_2_15_R1_B_scaffold_238_28
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42000..42416
DNA (417bp) protein (139aa)
Translation initiation inhibitor n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MCK5_PSEPS
Translation initiation inhibitor {ECO:0000313|EMBL:ELS24210.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
endoribonuclease L-PSP
SCN18_26_2_15_R1_B_scaffold_238_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42505..43461)
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39527.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCN18_26_2_15_R1_B_scaffold_238_30
unknown

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comp(43570..44055)
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying items 1-30 of 185 in total

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