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SCN18_30_10_14_R2_B_scaffold_4204

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4204_1
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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753..2090
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000375CE70
RND family efflux transporter MFP subunit
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_4204_2
SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, Plasmid-like

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2113..3708
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000375CE70
RND family efflux transporter MFP subunit
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_4204_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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3799..7044
DNA (3246bp) protein (1082aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FDAD81
Heavy metal efflux pump, CzcA family protein {ECO:0000313|EMBL:EDL57126.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
cation transporter
SCN18_30_10_14_R2_B_scaffold_4204_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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7044..7427
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F5A005
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_4204_5
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7490..7837
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AQQ9_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:EGF27963.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
heavy metal transport/detoxification protein
SCN18_30_10_14_R2_B_scaffold_4204_6
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7893..8630
DNA (738bp) protein (246aa)
Phage integrase family protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RE82_9PLAN
Phage integrase family protein {ECO:0000313|EMBL:EMI17381.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
integrase family protein
SCN18_30_10_14_R2_B_scaffold_4204_trna_1
unknown

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comp(8692..8764)
DNA (73bp)
transferRNA Glu
SCN18_30_10_14_R2_B_scaffold_4204_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8883..9932
DNA (1050bp) protein (350aa)
probable oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C594D
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGA30194.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4204_8
unknown

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comp(9929..10561)
DNA (633bp) protein (211aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4204_9
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10793..11662)
DNA (870bp) protein (290aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; TaxID=290512 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain DSM 271 / SK 413).;"
Bacitracin resistance protein BacA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C446A
SCN18_30_10_14_R2_B_scaffold_4204_10
unknown

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11767..12243
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E253A2
SCN18_30_10_14_R2_B_scaffold_4204_11
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12328..13143
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4981
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27587.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4204_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13163..13930
DNA (768bp) protein (256aa)
Uracil-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00148}; Short=UDG {ECO:0000255|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000255|HAMAP-Rule:MF_00148};; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
uracil-DNA glycosylase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5133
ung; uracil-DNA glycosylase
SCN18_30_10_14_R2_B_scaffold_4204_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13945..14310
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61240.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Displaying 14 items

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