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SCN18_30_10_14_R2_B_scaffold_4726

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4726_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(180..1562)
DNA (1383bp) protein (461aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AAE
Ribosome-dependent ATPase {ECO:0000313|EMBL:GAN34819.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
ABC transporter related
SCN18_30_10_14_R2_B_scaffold_4726_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1559..2623)
DNA (1065bp) protein (355aa)
glycoside hydrolase family 43 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AAD
HlyD family secretion protein {ECO:0000313|EMBL:GAN34818.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
HlyD family secretion protein
SCN18_30_10_14_R2_B_scaffold_4726_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(2936..5692)
DNA (2757bp) protein (919aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABJ84828.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABJ84828.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI000367C889
SCN18_30_10_14_R2_B_scaffold_4726_4
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(5693..6721)
DNA (1029bp) protein (343aa)
signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54BA
GAF sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_4726_5
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(6718..7398)
DNA (681bp) protein (227aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7J1_9BACT
anti-sigma regulatory factor, serine/threonine protein kinase
Tax=BJP_IG2069_Clostridiales_42_11
SCN18_30_10_14_R2_B_scaffold_4726_6
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(7714..8127)
DNA (414bp) protein (138aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7J0_9BACT
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:EDY17607.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma regulatory factor, serine/threonine protein kinase
SCN18_30_10_14_R2_B_scaffold_4726_7
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(8124..8495)
DNA (372bp) protein (124aa)
Anti-sigma-factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7I9_9BACT
Anti-sigma-factor antagonist {ECO:0000313|EMBL:EDY17606.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma-factor antagonist
SCN18_30_10_14_R2_B_scaffold_4726_8
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(8507..9463)
DNA (957bp) protein (319aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Methylomicrobium album BG8 RepID=H8GL03_METAL
anti-anti sigma factor protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_30_10_14_R2_B_scaffold_4726_9
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

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9849..11021
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4424
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62910.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Displaying 9 items

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