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SCN18_30_10_14_R2_B_scaffold_2036

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2036_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(119..6604)
DNA (6486bp) protein (2162aa)
transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4069
Membrane protein {ECO:0000313|EMBL:KHS16197.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
autotransporter-associated beta strand repeat family protein
SCN18_30_10_14_R2_B_scaffold_2036_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6667..15714)
DNA (9048bp) protein (3016aa)
Polymorphic membrane protein, Chlamydia:Haemagluttinin:Filamentous haemagglutinin-like n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSM3_9CHLB
Polymorphic membrane protein, Chlamydia:Haemagluttinin:Filamentous haemagglutinin-like {ECO:0000313|EMBL:EAT59373.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
conserved protein of unknown function; RTX toxins and related Ca2+-binding domain
SCN18_30_10_14_R2_B_scaffold_2036_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16190..17674
DNA (1485bp) protein (495aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL24_SINAD
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA29558.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2036_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17678..19096)
DNA (1419bp) protein (473aa)
SCN18_30_10_14_R2_B_scaffold_2036_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19106..19516)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFG9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82948.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
transporter family protein
SCN18_30_10_14_R2_B_scaffold_2036_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19542..20348)
DNA (807bp) protein (269aa)
sodium:proton antiporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42BC
Chromosome-partitioning ATPase protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
SCN18_30_10_14_R2_B_scaffold_2036_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20839..21435
DNA (597bp) protein (199aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4588
SCN18_30_10_14_R2_B_scaffold_2036_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21473..22771
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D41CB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75869.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_30_10_14_R2_B_scaffold_2036_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22768..25284
DNA (2517bp) protein (839aa)
probable cytochrome c-type biogenesis protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4589
cytochrome C assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ADG65876.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2036_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25405..26550
DNA (1146bp) protein (382aa)
oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C499E
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV64169.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2036_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26569..26820
DNA (252bp) protein (84aa)
Membrane protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S5Q0_9PLAN
Membrane protein {ECO:0000313|EMBL:EMI26810.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
SCN18_30_10_14_R2_B_scaffold_2036_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26918..27958)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1R9_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16788.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2036_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28027..28206)
DNA (180bp) protein (60aa)
SCN18_30_10_14_R2_B_scaffold_2036_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28203..28535)
DNA (333bp) protein (111aa)
SCN18_30_10_14_R2_B_scaffold_2036_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28720..29442)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C387C
SCN18_30_10_14_R2_B_scaffold_2036_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29558..32470)
DNA (2913bp) protein (971aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EC1
PBS lyase HEAT domain-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ADV61731.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2036_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32560..33849)
DNA (1290bp) protein (430aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
diaminopimelate decarboxylase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EC2
SCN18_30_10_14_R2_B_scaffold_2036_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33960..34805
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62795.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2036_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34889..35641
DNA (753bp) protein (251aa)
SCN18_30_10_14_R2_B_scaffold_2036_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35654..37033)
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
argininosuccinate lyase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50D8
argininosuccinate lyase
SCN18_30_10_14_R2_B_scaffold_2036_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37130..38731
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49AE
SCN18_30_10_14_R2_B_scaffold_2036_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38738..39142)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E28680
SCN18_30_10_14_R2_B_scaffold_2036_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39173..39664)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4419
Secreted protein containing DUF1549 {ECO:0000313|EMBL:EGF27950.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
hypothetical protein
Displaying 23 items

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