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SCN18_30_10_14_R2_B_scaffold_2044

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2044_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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48..1349
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25225.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2044_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1398..1937)
DNA (540bp) protein (180aa)
SCN18_30_10_14_R2_B_scaffold_2044_3
unknown

Not on your lists

comp(2038..2442)
DNA (405bp) protein (135aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2044_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2439..4019)
DNA (1581bp) protein (527aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
proton-translocating NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4663
SCN18_30_10_14_R2_B_scaffold_2044_5
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4152..4697
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000319E289
Putative uncharacterized protein {ECO:0000313|EMBL:EFX60045.1}; Flags: Fragment;; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
SCN18_30_10_14_R2_B_scaffold_2044_6
unknown

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5070..5915
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4742
SCN18_30_10_14_R2_B_scaffold_2044_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6164..6562)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C378A
forkhead-associated protein
Forkhead-associated protein {ECO:0000313|EMBL:ADY62143.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_2044_8
unknown

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comp(6644..8215)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AD1
SCN18_30_10_14_R2_B_scaffold_2044_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8406..9254)
DNA (849bp) protein (283aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AD0
3-deoxy-7-phosphoheptulonate synthase
SCN18_30_10_14_R2_B_scaffold_2044_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9496..10503
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B46883
Tax=RBG_13_Deltaproteobacteria_43_22_curated
SCN18_30_10_14_R2_B_scaffold_2044_11
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(10590..12089)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5472
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG80494.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
SCN18_30_10_14_R2_B_scaffold_2044_12
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(12108..13331)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5473
SCN18_30_10_14_R2_B_scaffold_2044_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13384..14175)
DNA (792bp) protein (264aa)
Possible biopolymer transport protein, ExbB family n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5474
Putative biopolymer transport protein, ExbB family {ECO:0000313|EMBL:KGE04462.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
putative biopolymer transport protein
SCN18_30_10_14_R2_B_scaffold_2044_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14364..15608
DNA (1245bp) protein (415aa)
FG-GAP repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5475
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ADB14737.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2044_15
unknown

Not on your lists

comp(15711..16907)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FC8
SCN18_30_10_14_R2_B_scaffold_2044_16
unknown

Not on your lists

comp(16885..17457)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FC9
SCN18_30_10_14_R2_B_scaffold_2044_17
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17450..17995)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FCA
Marine sediment metagenome DNA, contig: S01H1_L06536 {ECO:0000313|EMBL:GAF77629.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCN18_30_10_14_R2_B_scaffold_2044_18
unknown

Not on your lists

18106..18246
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2044_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18350..18751)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C477A
SCN18_30_10_14_R2_B_scaffold_2044_20
unknown

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comp(18890..19648)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57B1
SCN18_30_10_14_R2_B_scaffold_2044_21
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19819..20955
DNA (1137bp) protein (379aa)
serine--glyoxylate aminotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4779
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Tax=CG_Omnitr_02
SCN18_30_10_14_R2_B_scaffold_2044_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21100..21651
DNA (552bp) protein (184aa)
peptide chain release factor 2 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5029
peptide chain release factor I
Tax=BJP_IG2069_Chloroflexi_70_12
SCN18_30_10_14_R2_B_scaffold_2044_23
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

21761..22231
DNA (471bp) protein (157aa)
dual specificity protein phosphatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5028
Dual specificity protein phosphatase
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
SCN18_30_10_14_R2_B_scaffold_2044_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22251..23165)
DNA (915bp) protein (305aa)
putative carbohydrate translocase n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C469A
Uncharacterized protein {ECO:0000313|EMBL:CDM65836.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
wxcO; hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2044_25
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23162..24400)
DNA (1239bp) protein (413aa)
putative carbohydrate translocase n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C469A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC98965.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
Displaying 25 items

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