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SCN18_30_10_14_R2_B_scaffold_2140

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2140_1
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..737)
DNA (735bp) protein (245aa)
Hemolysin-type calcium-binding region n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VK53_9CYAN
Hemolysin-type calcium-binding region
Uncharacterized protein {ECO:0000313|EMBL:EEF62514.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCN18_30_10_14_R2_B_scaffold_2140_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1177..3402)
DNA (2226bp) protein (742aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFC83
Putative uncharacterized protein {ECO:0000313|EMBL:AAX07494.1}; Flags: Fragment;; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
serine/threonine kinase
SCN18_30_10_14_R2_B_scaffold_2140_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3490..4065
DNA (576bp) protein (192aa)
RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI000299DD4E
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB18057.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2140_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4185..5408)
DNA (1224bp) protein (408aa)
probable multidrug efflux pump, HlyD family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C532A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34713.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_30_10_14_R2_B_scaffold_2140_5
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(5405..8611)
DNA (3207bp) protein (1069aa)
RND transporter n=1 Tax=Zavarzinella formosa RepID=UPI00031B236E
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
AcrB/AcrD/AcrF family multidrug efflux protein
SCN18_30_10_14_R2_B_scaffold_2140_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8799..9428
DNA (630bp) protein (210aa)
gntR-family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5328
Transcriptional regulator {ECO:0000313|EMBL:ERN42265.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_2140_7
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(9436..11724)
DNA (2289bp) protein (763aa)
ferrichrome ABC transporter, permease protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35D4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27699.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2140_8
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11889..12716)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4E9DD
Uncharacterized protein {ECO:0000313|EMBL:EXI82575.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2140_9
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12779..13171
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB19208.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2140_10
scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, Eukaryote

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13182..14252
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F642A8
Dienelactone hydrolase family protein
Dienelactone hydrolase family protein {ECO:0000313|EMBL:AGA26539.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 10 items

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