ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2279

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2279_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..796)
DNA (795bp) protein (265aa)
Tetratricopeptide repeat protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD75_9PLAN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDL57320.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2279_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(896..1303)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E5A3DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50523.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_30_10_14_R2_B_scaffold_2279_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1397..1894)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002ED231C
SCN18_30_10_14_R2_B_scaffold_2279_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1944..2408)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Leptospira alstoni RepID=M6CWP8_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA81659.1}; TaxID=1218564 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira alstonii serovar Pingchang str. 80-412.;"
SCN18_30_10_14_R2_B_scaffold_2279_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2503..4008
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003163591
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31521.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2279_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4037..4180)
DNA (144bp) protein (48aa)
SCN18_30_10_14_R2_B_scaffold_2279_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4472..5542)
DNA (1071bp) protein (357aa)
Methyltransferase type 12 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38E7
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ABI59316.1}; Flags: Precursor;; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCN18_30_10_14_R2_B_scaffold_2279_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5539..6888)
DNA (1350bp) protein (450aa)
Cyanoalanine nitrilase {ECO:0000313|EMBL:EHP90751.1}; EC=3.5.5.4 {ECO:0000313|EMBL:EHP90751.1};; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E06763
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCN18_30_10_14_R2_B_scaffold_2279_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6906..8297)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BD7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84881.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_2279_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8412..9014)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BD7
Uncharacterized protein {ECO:0000313|EMBL:KIG16554.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Redoxin domain protein
SCN18_30_10_14_R2_B_scaffold_2279_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9069..9995)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4433
SCN18_30_10_14_R2_B_scaffold_2279_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10049..10741)
DNA (693bp) protein (231aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4434
Uncharacterized protein {ECO:0000313|EMBL:KJS36301.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCN18_30_10_14_R2_B_scaffold_2279_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10750..12897)
DNA (2148bp) protein (716aa)
excinuclease ABC subunit B n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4F05
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2279_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13074..13757
DNA (684bp) protein (228aa)
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2279_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13730..14575
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9S7_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51139.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 15 items

View Taxonomy