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SCN18_30_10_14_R2_B_scaffold_2324

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2324_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..1020
DNA (1020bp) protein (340aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH91_9DELT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
cbiB; cobalamin biosynthesis protein CbiB
SCN18_30_10_14_R2_B_scaffold_2324_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1017..2111
DNA (1095bp) protein (365aa)
Cobyric acid synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I587_CALAS
Uncharacterized protein {ECO:0000313|EMBL:ETW95551.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cobQ; cobyric acid synthase
SCN18_30_10_14_R2_B_scaffold_2324_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2099..2665
DNA (567bp) protein (189aa)
Phosphoglycerate mutase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BJ59_MEISD
Phosphoglycerate mutase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_30_10_14_R2_B_scaffold_2324_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2662..3612
DNA (951bp) protein (317aa)
Periplasmic binding protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDV0_9CHLR
Periplasmic binding protein {ECO:0000313|EMBL:EFO80635.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
periplasmic binding protein
SCN18_30_10_14_R2_B_scaffold_2324_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3609..4316
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037783CB
Cob(II)yrinic acid a,c-diamide reductase {ECO:0000313|EMBL:ENO14167.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
cob(II)yrinic acid a,c-diamide reductase
SCN18_30_10_14_R2_B_scaffold_2324_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4313..4915)
DNA (603bp) protein (201aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:AEP13285.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AEP13285.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKJ9_CHLTF
SCN18_30_10_14_R2_B_scaffold_2324_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4912..6423)
DNA (1512bp) protein (504aa)
Cobyric acid synthase n=2 Tax=Chloroflexus RepID=COBQ_CHLAA
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cobyric acid synthase
SCN18_30_10_14_R2_B_scaffold_2324_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6420..8246)
DNA (1827bp) protein (609aa)
Mg-chelatase subunit ChlI protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CW82_9BURK
Mg-chelatase subunit ChlI protein {ECO:0000313|EMBL:EIJ47875.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
ChlI component of cobalt chelatase involved in B12 biosynthesis
SCN18_30_10_14_R2_B_scaffold_2324_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8233..12576)
DNA (4344bp) protein (1448aa)
Cobaltochelatase, CobN subunit {ECO:0000313|EMBL:ACT96560.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ACT96560.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Cobaltochelatase, CobN subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU78_DYAFD
cobaltochelatase
SCN18_30_10_14_R2_B_scaffold_2324_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12588..14063)
DNA (1476bp) protein (492aa)
Cobalt ABC transporter, ATPase subunit {ECO:0000313|EMBL:EGV19004.1}; EC=3.6.3.30 {ECO:0000313|EMBL:EGV19004.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
cobalt ABC transporter ATP-binding protein (EC:3.6.3.25)
Cobalt ABC transporter, ATPase subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UA56_9GAMM
SCN18_30_10_14_R2_B_scaffold_2324_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14056..14355)
DNA (300bp) protein (100aa)
Cobalt transport protein cbiN n=1 Tax=Thiocapsa marina 5811 RepID=F9UA54_9GAMM
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
cobalt transporter CbiN
SCN18_30_10_14_R2_B_scaffold_2324_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14352..15017)
DNA (666bp) protein (222aa)
Cobalt transport protein CbiM 2 n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=CBIM2_PELPD
cobalt transport protein CbiM
Cobalt transport protein CbiM 2 {ECO:0000255|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM 2 {ECO:0000255|HAMAP-Rule:MF_01462}; Short=ECF transporter S component CbiM 2 {ECO:0000255|HAMAP-Rule:MF_01462};; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
SCN18_30_10_14_R2_B_scaffold_2324_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15416..16414
DNA (999bp) protein (333aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWS9_ISOPI
SCN18_30_10_14_R2_B_scaffold_2324_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16411..17244
DNA (834bp) protein (278aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Cobalamin synthase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWS8_ISOPI
cobalamin-5-phosphate synthase CobS
SCN18_30_10_14_R2_B_scaffold_2324_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17258..17803
DNA (546bp) protein (182aa)
Phosphoglycerate mutase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWS7_ISOPI
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADV62977.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2324_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17933..18865)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C510A
Displaying 16 items

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