ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2403

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2403_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI000381443A
Transposase {ECO:0000313|EMBL:EAQ81537.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
transposase family protein
SCN18_30_10_14_R2_B_scaffold_2403_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1055..1840
DNA (786bp) protein (262aa)
SCN18_30_10_14_R2_B_scaffold_2403_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1837..2421
DNA (585bp) protein (195aa)
SCN18_30_10_14_R2_B_scaffold_2403_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2411..2974
DNA (564bp) protein (188aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCU8_SINAD
DNA-directed RNA polymerase subunit sigma24
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA26695.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2403_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2971..5406
DNA (2436bp) protein (812aa)
Serine/threonine protein kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBD8_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA26694.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2403_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5641..8772
DNA (3132bp) protein (1044aa)
Cna B domain protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UHL3_9CYAN
Cna B domain protein {ECO:0000313|EMBL:EGK87700.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
Cna B domain protein
SCN18_30_10_14_R2_B_scaffold_2403_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9009..9362
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E7E767
hybrid histidine kinase
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG91508.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_30_10_14_R2_B_scaffold_2403_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9395..9739)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FD7552
Uncharacterized protein {ECO:0000313|EMBL:KFN50759.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
sensor/response regulator
SCN18_30_10_14_R2_B_scaffold_2403_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10079..10570
DNA (492bp) protein (164aa)
SCN18_30_10_14_R2_B_scaffold_2403_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10842..12062
DNA (1221bp) protein (407aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36BB
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADZ81149.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_30_10_14_R2_B_scaffold_2403_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11995..12480)
DNA (486bp) protein (162aa)
Transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2N7_9CHLR
transposase
Tax=RBG_16_KB1_OP1_55_9_curated
Displaying 11 items

View Taxonomy