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SCN18_30_10_14_R2_B_scaffold_2412

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2412_1
unknown

Not on your lists

comp(2..541)
DNA (540bp) protein (180aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2412_2
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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590..1165
DNA (576bp) protein (192aa)
siroheme synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4502
siroheme synthase
Siroheme synthase, N-terminal domain protein {ECO:0000313|EMBL:AGA24663.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2412_3
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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1299..3794
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4525
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88078.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_2412_4
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3876..4634)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E54_STIAD
3-demethylubiquinol 3-O-methyltransferase {ECO:0000313|EMBL:KFE69040.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
type 11 methyltransferase
SCN18_30_10_14_R2_B_scaffold_2412_5
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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4760..6301
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B3D
beta-lactamase
Tax=GWA2_Ignavibacteria_54_16_curated
SCN18_30_10_14_R2_B_scaffold_2412_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6336..7100
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EA0B1C
Uncharacterized protein {ECO:0000313|EMBL:ETW96732.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCN18_30_10_14_R2_B_scaffold_2412_7
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7127..8290
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4352
Uncharacterized protein {ECO:0000313|EMBL:EDL60981.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2412_8
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8295..8804)
DNA (510bp) protein (170aa)
luxQ1; autoinducer 2 sensor kinase/phosphatase LuxQ (EC:2.7.13.3 3.1.3.-)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E1D
Diguanylate cyclase {ECO:0000313|EMBL:KAK49236.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
SCN18_30_10_14_R2_B_scaffold_2412_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9070..9432
DNA (363bp) protein (121aa)
carbon storage regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5906
carbon storage regulator CsrA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCN18_30_10_14_R2_B_scaffold_2412_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9613..10455
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FD6BBF
Uncharacterized protein {ECO:0000313|EMBL:EDL59125.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2412_11
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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10978..12696
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5909
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31540.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2412_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12933..14198
DNA (1266bp) protein (422aa)
Twin-arginine translocation pathway signal n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C590A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31541.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2412_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14350..15159)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUB0_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22700.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 13 items

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