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SCN18_30_10_14_R2_B_scaffold_2505

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2505_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2..649)
DNA (648bp) protein (216aa)
WD-40 repeat n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DE2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sigma-70 family RNA polymerase sigma factor
SCN18_30_10_14_R2_B_scaffold_2505_2
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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799..1173
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003136804
Uncharacterized protein {ECO:0000313|EMBL:EAY28424.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
SCN18_30_10_14_R2_B_scaffold_2505_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1243..1983
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDP9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62195.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2505_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1980..3092
DNA (1113bp) protein (371aa)
Metal dependent phosphohydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDP8_9BACT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EEF62194.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
metal dependent phosphohydrolase
SCN18_30_10_14_R2_B_scaffold_2505_5
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3228..6038
DNA (2811bp) protein (937aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4F7A
hypothetical protein
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol {ECO:0000313|EMBL:AGA25315.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2505_6
Vibrio sp. S2757, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6035..6487)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Vibrio rotiferianus RepID=UPI00023767E3
Peptide chain release factor A {ECO:0000313|EMBL:KJY84924.1}; TaxID=579748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. S2757.;"
peptide chain release factor A
SCN18_30_10_14_R2_B_scaffold_2505_7
unknown

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6697..7230
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59F2
SCN18_30_10_14_R2_B_scaffold_2505_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7323..11138)
DNA (3816bp) protein (1272aa)
Antirepressor regulating drug resistance protein n=2 Tax=Singulisphaera acidiphila RepID=L0D7S1_SINAD
antirepressor regulating drug resistance protein
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGA24706.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2505_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11436..12614
DNA (1179bp) protein (393aa)
ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5336
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADB16295.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying 9 items

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