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SCN18_30_10_14_R2_B_scaffold_2512

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2512_1
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..951
DNA (951bp) protein (317aa)
signal peptide protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00036A6050
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGA30725.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2512_2
unknown

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1011..1469
DNA (459bp) protein (153aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2512_3
unknown

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comp(1562..2848)
DNA (1287bp) protein (429aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2512_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2987..3988)
DNA (1002bp) protein (334aa)
quinone oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BE5
NADPH2:quinone reductase {ECO:0000313|EMBL:BAL54272.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_2512_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4161..5045
DNA (885bp) protein (295aa)
phenylalanine 4-monooxygenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BE6
phhA; phenylalanine 4-monooxygenase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
SCN18_30_10_14_R2_B_scaffold_2512_6
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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5220..6320
DNA (1101bp) protein (367aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:CCW36416.1}; EC=1.13.11.27 {ECO:0000313|EMBL:CCW36416.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BE7
SCN18_30_10_14_R2_B_scaffold_2512_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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6573..7433
DNA (861bp) protein (287aa)
Tax=RBG_16_Spirochaete_67_19_curated
SCN18_30_10_14_R2_B_scaffold_2512_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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7452..8165
DNA (714bp) protein (238aa)
fumarylacetoacetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BEA
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:AGA25466.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2512_9
unknown

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8162..8380
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BEB
SCN18_30_10_14_R2_B_scaffold_2512_10
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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8744..9910
DNA (1167bp) protein (389aa)
DNA helicase RuvA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BEC
homogentisate 1,2-dioxygenase
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:AGA25465.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2512_11
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10010..10615
DNA (606bp) protein (202aa)
flavin reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54EF
hypothetical protein
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:AGA25464.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2512_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(10627..11379)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4682
peptidase M50
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_2512_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11445..12584
DNA (1140bp) protein (380aa)
aminotransferase class V n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4681
selenocysteine lyase
Selenocysteine lyase {ECO:0000313|EMBL:AGA30492.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2512_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12783..13307
DNA (525bp) protein (175aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
phosphopantetheine adenylyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4680
pantetheine-phosphate adenylyltransferase
SCN18_30_10_14_R2_B_scaffold_2512_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13382..14974)
DNA (1593bp) protein (531aa)
Small GTP-binding protein domain n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50A2
GTP-binding protein HSR1-like protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_2512_16
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15133..16353)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50A3
Uncharacterized protein {ECO:0000313|EMBL:EMI16819.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
Displaying 16 items

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