ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2584

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2584_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2..415
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3535
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADB17773.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2584_2
unknown

Not on your lists

comp(490..630)
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2584_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1069..3363)
DNA (2295bp) protein (765aa)
carbon starvation protein CstA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D56
Carbon starvation protein CstA {ECO:0000313|EMBL:BAL53830.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
carbon starvation membrane protein
SCN18_30_10_14_R2_B_scaffold_2584_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3529..4044
DNA (516bp) protein (172aa)
DNA recombination protein RmuC n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E3D
Ferritin Dps family protein {ECO:0000313|EMBL:EHC09703.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
ferritin Dps family protein
SCN18_30_10_14_R2_B_scaffold_2584_5
unknown

Not on your lists

4112..4285
DNA (174bp) protein (58aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2584_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4345..5133
DNA (789bp) protein (263aa)
alpha/beta hydrolase fold protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D4D
alpha/beta hydrolase fold protein domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
SCN18_30_10_14_R2_B_scaffold_2584_7
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

comp(5308..5898)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5443
SCN18_30_10_14_R2_B_scaffold_2584_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6218..7048
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56AC
Uncharacterized protein {ECO:0000313|EMBL:ADB19219.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2584_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7137..9338
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F0
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54998.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
protein of unknown function DUF1549
SCN18_30_10_14_R2_B_scaffold_2584_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9450..10889
DNA (1440bp) protein (480aa)
sulfatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB19175.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2584_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11020..12393
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28909.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2584_12
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13705)
DNA (1197bp) protein (399aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase {ECO:0000313|EMBL:ABC78148.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC78148.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
glycosyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C475F
SCN18_30_10_14_R2_B_scaffold_2584_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13854..15248
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F5
Uncharacterized protein {ECO:0000313|EMBL:EDL60876.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2584_14
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

16446..17351
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F0ABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99093.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 14 items

View Taxonomy