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SCN18_30_10_14_R2_B_scaffold_2718

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2718_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1036)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E4AD6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26736.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1152..1916
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00036660EC
hypothetical protein
NACHT nucleoside triphosphatase {ECO:0000313|EMBL:CDM37253.1}; TaxID=1365484 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium roqueforti FM164.;"
SCN18_30_10_14_R2_B_scaffold_2718_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2081..2935
DNA (855bp) protein (285aa)
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EEE
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28464.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3226..3978
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KRI8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG44713.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2718_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4208..4594
DNA (387bp) protein (129aa)
SCN18_30_10_14_R2_B_scaffold_2718_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4621..4812
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E3A887
Marine sediment metagenome DNA, contig: S01H1_S12078 {ECO:0000313|EMBL:GAG05257.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_2718_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4863..5711
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3BA9
lysophospholipase L1-like esterase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:AGA29870.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5716..5919)
DNA (204bp) protein (68aa)
SCN18_30_10_14_R2_B_scaffold_2718_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6026..6430)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38C0
SCN18_30_10_14_R2_B_scaffold_2718_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6904..7167)
DNA (264bp) protein (88aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRN6_9CYAN
penicillin-binding protein, beta-lactamase class C
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_30_10_14_R2_B_scaffold_2718_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7389..7577)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_30_10_14_R2_B_scaffold_2718_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7715..8119)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18773.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2718_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8142..8597)
DNA (456bp) protein (152aa)
MarR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B23
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AIB15154.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_2718_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8916..9251
DNA (336bp) protein (112aa)
ribosomal subunit interface protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41E8
Sigma 54 modulation protein / S30EA ribosomal protein
Sigma 54 modulation protein / S30EA ribosomal protein {ECO:0000313|EMBL:AGA25669.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9465..10559)
DNA (1095bp) protein (365aa)
esterase n=1 Tax=Zavarzinella formosa RepID=UPI0002E64E47
enterochelin esterase-like enzyme
Enterochelin esterase-like enzyme {ECO:0000313|EMBL:AGA26402.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10898..11710)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEX4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27390.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12027..13292
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFV5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28254.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2718_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13351..14460)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F0A737
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86777.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_2718_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14670..15155
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C585D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY60431.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
Displaying 19 items

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