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SCN18_30_10_14_R2_B_scaffold_2722

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2722_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
SCN18_30_10_14_R2_B_scaffold_2722_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147..569)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHR2_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI68745.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_30_10_14_R2_B_scaffold_2722_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1156..1956
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GJP5_METAL
Short-chain dehydrogenase {ECO:0000313|EMBL:AKH38518.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R2_B_scaffold_2722_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2248..2436
DNA (189bp) protein (63aa)
SCN18_30_10_14_R2_B_scaffold_2722_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2746..4830
DNA (2085bp) protein (695aa)
Catalase {ECO:0000256|RuleBase:RU000498, ECO:0000313|EMBL:KJB95439.1}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative catalase (EC:1.11.1.6)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003100AB3
SCN18_30_10_14_R2_B_scaffold_2722_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4893..5366
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C389E
SCN18_30_10_14_R2_B_scaffold_2722_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6559..7041)
DNA (483bp) protein (161aa)
membrane protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4926
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53418.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
SCN18_30_10_14_R2_B_scaffold_2722_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7714..8610
DNA (897bp) protein (299aa)
Isocitrate lyase and phosphorylmutase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6Y7_MESOW
Isocitrate lyase and phosphorylmutase {ECO:0000313|EMBL:CDX21494.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
isocitrate lyase and phosphorylmutase
SCN18_30_10_14_R2_B_scaffold_2722_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8657..8827)
DNA (171bp) protein (57aa)
SCN18_30_10_14_R2_B_scaffold_2722_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8824..9105)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5410
GlgB; 1,4-alpha-glucan branching enzyme
Tax=GWA2_Elusimicrobia_51_34_curated
SCN18_30_10_14_R2_B_scaffold_2722_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9102..9575)
DNA (474bp) protein (158aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEB9_DESAR
Tax=RIFOXYC2_FULL_Syntrophobacterales_60_23_curated
SCN18_30_10_14_R2_B_scaffold_2722_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9714..10175)
DNA (462bp) protein (154aa)
SCN18_30_10_14_R2_B_scaffold_2722_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10394..10774)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003177BC9
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:EYF06821.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
atypical hybrid histidine kinase
SCN18_30_10_14_R2_B_scaffold_2722_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10961..11311
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51ED
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
SCN18_30_10_14_R2_B_scaffold_2722_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11342..11536
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51EE
SCN18_30_10_14_R2_B_scaffold_2722_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11539..11760
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51EE
SCN18_30_10_14_R2_B_scaffold_2722_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11757..12650)
DNA (894bp) protein (298aa)
SIR2 family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKL0_9PROT
SIR2 family protein {ECO:0000313|EMBL:CCU63372.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Sir2 family NAD-dependent protein deacetylase
SCN18_30_10_14_R2_B_scaffold_2722_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12592..13149)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C540A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15511.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2722_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13244..13780)
DNA (537bp) protein (179aa)
putative outer membrane protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C540D
Uncharacterized protein {ECO:0000313|EMBL:CDP52983.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2722_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13816..13992)
DNA (177bp) protein (59aa)
SCN18_30_10_14_R2_B_scaffold_2722_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14327..14503
DNA (177bp) protein (59aa)
SCN18_30_10_14_R2_B_scaffold_2722_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14804..15034
DNA (231bp) protein (77aa)
SCN18_30_10_14_R2_B_scaffold_2722_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15049..15753)
DNA (705bp) protein (235aa)
Putative per-hexamer repeat protein 5 n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G3I5_9CYAN
Putative per-hexamer repeat protein 5 {ECO:0000313|EMBL:CBN57175.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2722_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16020..16328
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51EB
Uncharacterized protein {ECO:0000313|EMBL:EMI22980.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2722_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16565..19435
DNA (2871bp) protein (957aa)
Assimilatory nitrate reductase large subunit {ECO:0000313|EMBL:EYD77711.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EYD77711.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
narB3; nitrate reductase (EC:1.7.99.4)
Nitrate reductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCZ8_SORC5
SCN18_30_10_14_R2_B_scaffold_2722_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19696..20172)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036CF9CF
Uncharacterized protein {ECO:0000313|EMBL:EDL56627.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2722_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20220..21188)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000380D2C0
Uncharacterized protein {ECO:0000313|EMBL:EAQ81755.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2722_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21768..22076)
DNA (309bp) protein (103aa)
SCN18_30_10_14_R2_B_scaffold_2722_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22150..23808)
DNA (1659bp) protein (553aa)
aldehyde dehydrogenase (EC:1.2.1.-)
Aldehyde dehydrogenase {ECO:0000313|EMBL:BAN48453.1}; EC=1.2.1.- {ECO:0000313|EMBL:BAN48453.1};; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
Aldehyde dehydrogenase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ARD1_PSERE
SCN18_30_10_14_R2_B_scaffold_2722_30
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23836..25449)
DNA (1614bp) protein (538aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AF29_PSERE
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAN48452.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
Displaying items 1-30 of 33 in total

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