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SCN18_30_10_14_R2_B_scaffold_2965

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2965_1
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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2..454
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F54
ATPase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
SCN18_30_10_14_R2_B_scaffold_2965_2
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

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500..1846
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5447
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33210.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_30_10_14_R2_B_scaffold_2965_3
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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1915..2937
DNA (1023bp) protein (341aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030FD7CC
SCN18_30_10_14_R2_B_scaffold_2965_4
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2960..3886
DNA (927bp) protein (309aa)
inosine-uridine preferring nucleoside hydrolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C357F
inosine/uridine-preferring nucleoside hydrolase
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_2965_5
unknown

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comp(3892..4179)
DNA (288bp) protein (96aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2965_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4244..5623)
DNA (1380bp) protein (460aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5700
Na+ dependent nucleoside transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SCN18_30_10_14_R2_B_scaffold_2965_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5822..6784)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DEE
Signal peptide prediction {ECO:0000313|EMBL:KIG17959.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
thioesterase
SCN18_30_10_14_R2_B_scaffold_2965_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6902..8599
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000304F467
peptide synthase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABQ26198.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCN18_30_10_14_R2_B_scaffold_2965_9
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8694..9680
DNA (987bp) protein (329aa)
3-beta hydroxysteroid dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C536A
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating {ECO:0000313|EMBL:GAM11036.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
3-beta-hydroxysteroid dehydrogenase/isomerase family protein
SCN18_30_10_14_R2_B_scaffold_2965_10
unknown

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comp(9753..10886)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40A5
SCN18_30_10_14_R2_B_scaffold_2965_11
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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11240..12031
DNA (792bp) protein (264aa)
Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=H2KMI2_BORSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDK37104.2}; TaxID=294746 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Meyerozyma.;" source="Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM; 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii).;"
SCN18_30_10_14_R2_B_scaffold_2965_12
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12688..13119)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL15_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96606.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_30_10_14_R2_B_scaffold_2965_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13201..14121)
DNA (921bp) protein (307aa)
probable transport ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E4A
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGA27591.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2965_14
unknown

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comp(14329..14781)
DNA (453bp) protein (151aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2965_15
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14861..15853)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037F7F6D
lactate dehydrogenase-like oxidoreductase
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGA27818.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2965_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16303..16758
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E48
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_2965_17
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


16825..18699
DNA (1875bp) protein (625aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
arginyl-tRNA synthetase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E47
arginyl-tRNA synthetase
Displaying 17 items

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