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SCN18_30_10_14_R2_B_scaffold_904

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_904_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..753)
DNA (753bp) protein (251aa)
Putative Transporter, major facilitator family n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z3C5_9BACT
Putative Transporter, major facilitator family {ECO:0000313|EMBL:CCQ92002.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_904_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1115..1414)
DNA (300bp) protein (100aa)
SCN18_30_10_14_R2_B_scaffold_904_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2078..2983)
DNA (906bp) protein (302aa)
ParB-like partition protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRM7_SINAD
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGA31650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_904_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2988..3788)
DNA (801bp) protein (267aa)
ATPase involved in chromosome partitioning n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRH9_SINAD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGA31605.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_904_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3968..5287
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RAR5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI16465.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
SCN18_30_10_14_R2_B_scaffold_904_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6936..7625
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AGS4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB16330.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
SCN18_30_10_14_R2_B_scaffold_904_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7744..8157
DNA (414bp) protein (138aa)
ArsR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41F7
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGG81903.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Transcriptional repressor smtB
SCN18_30_10_14_R2_B_scaffold_904_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8189..9094
DNA (906bp) protein (302aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZAY5_TERRK
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFL86403.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCN18_30_10_14_R2_B_scaffold_904_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9103..9588
DNA (486bp) protein (162aa)
Protein tyrosine phosphatase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SH48_PLABD
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADY60589.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_904_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9585..9986
DNA (402bp) protein (134aa)
protein tyrosine phosphatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51E5
Protein tyrosine phosphatase {ECO:0000313|EMBL:KER09653.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
protein tyrosine phosphatase
SCN18_30_10_14_R2_B_scaffold_904_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10053..11159
DNA (1107bp) protein (369aa)
arsenic transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41FA
arsenical-resistance protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SCN18_30_10_14_R2_B_scaffold_904_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11176..11481
DNA (306bp) protein (102aa)
SCN18_30_10_14_R2_B_scaffold_904_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11542..13278
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E07C4A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11237.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_30_10_14_R2_B_scaffold_904_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13311..14372
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F0B92E
phosphate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SCN18_30_10_14_R2_B_scaffold_904_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14369..16279
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FB18B4
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) {ECO:0000313|EMBL:EHN10817.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphate ABC transporter, inner membrane subunit PstC
SCN18_30_10_14_R2_B_scaffold_904_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16468..17295
DNA (828bp) protein (276aa)
phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
phosphate ABC transporter ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C44D4
SCN18_30_10_14_R2_B_scaffold_904_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17526..17951
DNA (426bp) protein (142aa)
ArsR family transcriptional regulator id=12556491 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ArsR family transcriptional regulator
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_904_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17961..18941)
DNA (981bp) protein (327aa)
Site-specific recombinase XerD n=2 Tax=Singulisphaera acidiphila RepID=L0DQC3_SINAD
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA31614.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_904_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19023..19304)
DNA (282bp) protein (94aa)
SCN18_30_10_14_R2_B_scaffold_904_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19471..19986)
DNA (516bp) protein (172aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
Carboxymuconolactone decarboxylase domain protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RGM1_9PLAN
macrophage infectivity potentiator protein Mip
SCN18_30_10_14_R2_B_scaffold_904_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20028..20630)
DNA (603bp) protein (201aa)
Methyltransferase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHX1_SINAD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGA28445.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_904_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20670..21161)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26518.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
signal peptide protein
SCN18_30_10_14_R2_B_scaffold_904_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21198..21884)
DNA (687bp) protein (229aa)
Transcriptional regulator, ArsR family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVJ0_9BACT
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCW35441.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCN18_30_10_14_R2_B_scaffold_904_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22152..22433)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Paenibacillus polymyxa RepID=UPI000360B101
Uncharacterized protein {ECO:0000313|EMBL:ETT54335.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_904_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22449..22757)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SE35_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKK84749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_904_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23156..24241
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AHA4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB16485.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_904_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24282..24548
DNA (267bp) protein (89aa)
SCN18_30_10_14_R2_B_scaffold_904_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24923..26761
DNA (1839bp) protein (613aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
hypothetical protein n=2 Tax=Mastigocladopsis repens RepID=UPI0003005C2A
Maturase {ECO:0000313|EMBL:KIJ81157.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
SCN18_30_10_14_R2_B_scaffold_904_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26758..27036
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EC069B
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_904_30
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27236..28393
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B10
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
Displaying items 1-30 of 34 in total

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