ggKbase home page

SCN18_30_10_14_R2_B_scaffold_997

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_997_1
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..162
DNA (162bp) protein (54aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A63AA
hypothetical protein
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol {ECO:0000313|EMBL:AGA29712.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_997_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238..1080
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036C47BB
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=CG_Arma_02
SCN18_30_10_14_R2_B_scaffold_997_3
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1146..2276)
DNA (1131bp) protein (377aa)
putative esterase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59F7
esterase
Putative esterase {ECO:0000313|EMBL:ABF42246.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCN18_30_10_14_R2_B_scaffold_997_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2308..5145)
DNA (2838bp) protein (946aa)
Probable L-sorbosone dehydrogenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAJ9_9PLAN
Probable L-sorbosone dehydrogenase {ECO:0000313|EMBL:EDL58302.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
membrane-bound dehydrogenase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_997_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5232..6182)
DNA (951bp) protein (317aa)
amidohydrolase 2 n=1 Tax=Schlesneria paludicola RepID=UPI00029ADEDF
Amidohydrolase 2 {ECO:0000313|EMBL:EAQ79261.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
TIM-barrel fold metal-dependent hydrolase
SCN18_30_10_14_R2_B_scaffold_997_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6495..8744
DNA (2250bp) protein (750aa)
S-layer protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AABC4
Probable S-layer related protein (Precursor) {ECO:0000313|EMBL:EAQ79667.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_997_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8753..11020
DNA (2268bp) protein (756aa)
serine protease n=1 Tax=Schlesneria paludicola RepID=UPI00029B3FBB
Uncharacterized protein {ECO:0000313|EMBL:EDL61206.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
peptidase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_997_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11017..12441
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A805B
Uncharacterized protein {ECO:0000313|EMBL:EAQ79669.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_997_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12454..13581)
DNA (1128bp) protein (376aa)
Prolyl oligopeptidase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHM1_SINAD
prolyl oligopeptidase family protein
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:AGA28313.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_997_10
unknown

Not on your lists

13611..13712
DNA (102bp) protein (34aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_997_11
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13691..15007)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPB1_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77600.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_30_10_14_R2_B_scaffold_997_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15302..15583)
DNA (282bp) protein (94aa)
Anti-sigma factor antagonist n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZJ3_PIRSD
anti-sigma-factor antagonist
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_997_13
unknown

Not on your lists

15834..16001
DNA (168bp) protein (56aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_997_14
unknown

Not on your lists

comp(16121..16549)
DNA (429bp) protein (143aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_997_15
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16674..17300
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000318A222
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG68211.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_997_16
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17464..18738)
DNA (1275bp) protein (425aa)
aryldialkylphosphatase n=1 Tax=Zavarzinella formosa RepID=UPI0002F45D1C
Aryldialkylphosphatase related protein {ECO:0000313|EMBL:EAQ78526.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
cytosine deaminase
SCN18_30_10_14_R2_B_scaffold_997_17
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18757..19602)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F392B3
Putative hydrolase {ECO:0000313|EMBL:EAQ78525.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
alpha/beta hydrolase fold protein
SCN18_30_10_14_R2_B_scaffold_997_18
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19613..20761)
DNA (1149bp) protein (383aa)
oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C403A
Oxidoreductase domain protein {ECO:0000313|EMBL:EDY21863.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dehydrogenase
SCN18_30_10_14_R2_B_scaffold_997_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21395..21760)
DNA (366bp) protein (122aa)
anti-anti-sigma regulatory factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AEA
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_997_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21896..22426)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF11503.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_30_10_14_R2_B_scaffold_997_21
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(22430..23527)
DNA (1098bp) protein (366aa)
D-alanine--D-alanine ligase {ECO:0000256|SAAS:SAAS00233243}; EC=6.3.2.4 {ECO:0000256|SAAS:SAAS00233243};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
D-ala D-ala ligase domain protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4691
ATP-grasp enzyme, D-alanine-D-alanine ligase
SCN18_30_10_14_R2_B_scaffold_997_22
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23686..24708)
DNA (1023bp) protein (341aa)
D-ala D-ala ligase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4695
ATP-grasp enzyme, D-alanine-D-alanine ligase
Tax=RBG_13_Chloroflexi_60_13_curated
SCN18_30_10_14_R2_B_scaffold_997_23
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24776..25615)
DNA (840bp) protein (280aa)
lysine 2,3-aminomutase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4697
KamA family protein
KamA family protein {ECO:0000313|EMBL:AGA30302.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_997_24
SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(25612..26202)
DNA (591bp) protein (197aa)
lysine 2,3-aminomutase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4697
KamA family protein
KamA family protein {ECO:0000313|EMBL:AGA30302.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_997_25
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26500..29082
DNA (2583bp) protein (861aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42AE
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_997_26
unknown

Not on your lists

comp(29079..29813)
DNA (735bp) protein (245aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_997_27
unknown

Not on your lists

29867..30040
DNA (174bp) protein (58aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_997_28
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30321..31112)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2D765_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAY23582.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
TonB family protein
SCN18_30_10_14_R2_B_scaffold_997_29
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31297..31791
DNA (495bp) protein (165aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58FB
dTDP-4-dehydrorhamnose 35-epimerase-like protein
dTDP-4-dehydrorhamnose 35-epimerase related protein {ECO:0000313|EMBL:ADW13780.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
SCN18_30_10_14_R2_B_scaffold_997_30
unknown

Not on your lists

31834..32790
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F1EB6E
Displaying items 1-30 of 66 in total

View Taxonomy