ggKbase home page

SCN18_30_10_14_R2_B_scaffold_7460

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_7460_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


1..129
DNA (129bp) protein (43aa)
50S ribosomal protein L21 n=1 Tax=Microbacterium RepID=UPI0003641855
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rplU; ribosomal protein L21
SCN18_30_10_14_R2_B_scaffold_7460_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


144..410
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CD2
50S ribosomal protein L27
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_30_10_14_R2_B_scaffold_7460_3
SCN_Clostridium_9x, SCN_Clostridium_9x, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(656..1864)
DNA (1209bp) protein (403aa)
phosphoglycerate mutase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DEB
Phosphoglycerate mutase {ECO:0000313|EMBL:BAL57174.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
SCN18_30_10_14_R2_B_scaffold_7460_4
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1978..3483
DNA (1506bp) protein (502aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
glucose-6-phosphate isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DEA
SCN18_30_10_14_R2_B_scaffold_7460_5
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(3662..4303)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6R9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:ETX02886.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_7460_6
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5432
DNA (777bp) protein (259aa)
dinitrogenase reductase activating glycohydrolase (draG) (EC:3.2.2.24)
dinitrogenase reductase activating glycohydrolase (draG) n=1 Tax=Schlesneria paludicola RepID=UPI000299F972
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EMI25628.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
SCN18_30_10_14_R2_B_scaffold_7460_7
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..7106
DNA (1560bp) protein (520aa)
Ankyrin repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DR30_SINAD
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGA31478.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_7460_8
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7130..8308)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZS43_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ80501.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
penicillin-binding protein, beta-lactamase class C
SCN18_30_10_14_R2_B_scaffold_7460_9
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8581..9348)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CB69C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL05171.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
Displaying 9 items

View Taxonomy