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SCN18_30_10_14_R2_B_scaffold_1115

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1115_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

234..671
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030B1FD8
SCN18_30_10_14_R2_B_scaffold_1115_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1098..1607
DNA (510bp) protein (170aa)
SCN18_30_10_14_R2_B_scaffold_1115_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1665..2000
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UF40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETW96044.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1115_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2502..2801
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5681
SCN18_30_10_14_R2_B_scaffold_1115_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2794..3372
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5682
SCN18_30_10_14_R2_B_scaffold_1115_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3719..4147
DNA (429bp) protein (143aa)
SCN18_30_10_14_R2_B_scaffold_1115_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4245..4835
DNA (591bp) protein (197aa)
Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADU3_CARHZ
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABB16137.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
SCN18_30_10_14_R2_B_scaffold_1115_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4964..7756
DNA (2793bp) protein (931aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK27_DESB2
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1115_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7920..8201
DNA (282bp) protein (94aa)
SCN18_30_10_14_R2_B_scaffold_1115_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8299..8931
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RVV7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI19532.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
SCN18_30_10_14_R2_B_scaffold_1115_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8934..11243
DNA (2310bp) protein (770aa)
DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1K1_9GAMM
DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains {ECO:0000313|EMBL:EIC21446.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
polA1; DNA polymerase I, thermostable
SCN18_30_10_14_R2_B_scaffold_1115_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11233..11607
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFB4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05833.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_30_10_14_R2_B_scaffold_1115_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11734..13287
DNA (1554bp) protein (518aa)
probable integrase-recombinase protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5697
Uncharacterized protein {ECO:0000313|EMBL:KKM14904.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_1115_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13408..14688
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000316B69A
Integrase-recombinase protein {ECO:0000313|EMBL:EMI58129.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
integrase-recombinase
SCN18_30_10_14_R2_B_scaffold_1115_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14748..16043)
DNA (1296bp) protein (432aa)
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EEE
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA31218.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1115_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16249..16473
DNA (225bp) protein (75aa)
SCN18_30_10_14_R2_B_scaffold_1115_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16764..17147
DNA (384bp) protein (128aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Hybrid histidine kinase n=1 Tax=Burkholderia sp. SJ98 RepID=K8RJ10_9BURK
Hybrid histidine kinase {ECO:0000313|EMBL:EKS69941.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
SCN18_30_10_14_R2_B_scaffold_1115_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17299..17577
DNA (279bp) protein (93aa)
SCN18_30_10_14_R2_B_scaffold_1115_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17700..17945
DNA (246bp) protein (82aa)
SCN18_30_10_14_R2_B_scaffold_1115_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18352..19401)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XLZ8_DESMR
Uncharacterized protein {ECO:0000313|EMBL:KKL92031.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1115_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19482..19688)
DNA (207bp) protein (69aa)
SCN18_30_10_14_R2_B_scaffold_1115_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19791..19967)
DNA (177bp) protein (59aa)
SCN18_30_10_14_R2_B_scaffold_1115_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20076..20255)
DNA (180bp) protein (60aa)
SCN18_30_10_14_R2_B_scaffold_1115_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20298..20894)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=uncultured phage MedDCM-OCT-S04-C348 RepID=D6PHA9_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:ADD95110.1}; TaxID=743545 species="Viruses; environmental samples.;" source="uncultured phage MedDCM-OCT-S04-C348.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1115_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20904..21125)
DNA (222bp) protein (74aa)
SCN18_30_10_14_R2_B_scaffold_1115_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21186..21326)
DNA (141bp) protein (47aa)
SCN18_30_10_14_R2_B_scaffold_1115_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21527..22042)
DNA (516bp) protein (172aa)
SCN18_30_10_14_R2_B_scaffold_1115_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22110..22490)
DNA (381bp) protein (127aa)
SCN18_30_10_14_R2_B_scaffold_1115_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23025..24434
DNA (1410bp) protein (470aa)
AAA-4 family protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SNH5_PLABD
ATPase AAA
AAA-4 family protein {ECO:0000313|EMBL:ADY57809.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1115_30
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24446..24973)
DNA (528bp) protein (176aa)
NUMOD4 motif/HNH endonuclease n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S9J9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEH09286.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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