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SCN18_30_10_14_R2_B_scaffold_1121

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1121_1
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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comp(23..1261)
DNA (1239bp) protein (413aa)
SCN18_30_10_14_R2_B_scaffold_1121_2
unknown

Not on your lists

comp(1233..1385)
DNA (153bp) protein (51aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1460..1792)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L005_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED37706.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCN18_30_10_14_R2_B_scaffold_1121_4
SCNPILOT_SOLID2_TRIM150_Phage_5, SCNPILOT_SOLID2_TRIM150_Phage_5, SCNPILOT_SOLID2_TRIM150_Phage_5, SCNPILOT_SOLID2_TRIM150_Phage_5, SCNPILOT_SOLID2_TRIM150_Phage_5, Phage

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comp(1802..2200)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1121_5
unknown

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comp(2246..2737)
DNA (492bp) protein (164aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_6
unknown

Not on your lists

comp(2730..3077)
DNA (348bp) protein (116aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3087..3680)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZE2_PLAL2
phiE125 gp8 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG70062.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_1121_8
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3933..5222)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003614A84
SCN18_30_10_14_R2_B_scaffold_1121_9
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5269..5811)
DNA (543bp) protein (181aa)
SCN18_30_10_14_R2_B_scaffold_1121_10
SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(5783..7276)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003799848
histone H1
Histone H1 {ECO:0000313|EMBL:AIA41598.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
SCN18_30_10_14_R2_B_scaffold_1121_11
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(7286..8896)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D6B0EE
Uncharacterized protein {ECO:0000313|EMBL:KKN94444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage terminase
SCN18_30_10_14_R2_B_scaffold_1121_12
unknown

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comp(8930..9151)
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_13
unknown

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comp(9165..9488)
DNA (324bp) protein (108aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_14
unknown

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comp(9485..9796)
DNA (312bp) protein (104aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_15
unknown

Not on your lists

comp(10098..10274)
DNA (177bp) protein (59aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_16
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10303..11958)
DNA (1656bp) protein (552aa)
Collagen triple helix repeat n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PHC0_RHOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH55219.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCN18_30_10_14_R2_B_scaffold_1121_17
unknown

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comp(12227..13177)
DNA (951bp) protein (317aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_trna_1
unknown

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comp(13452..13524)
DNA (73bp)
transferRNA Met
SCN18_30_10_14_R2_B_scaffold_1121_18
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13737..17279
DNA (3543bp) protein (1181aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5898
heme-binding protein
Heme-binding protein {ECO:0000313|EMBL:ADY62364.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1121_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17411..18367)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F4116F
hypothetical protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA31136.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1121_20
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18627..18848)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5897
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKK03912.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
SCN18_30_10_14_R2_B_scaffold_1121_21
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(19245..20210)
DNA (966bp) protein (322aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5916
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1121_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20500..21921
DNA (1422bp) protein (474aa)
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TS32_9PLAN
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:EMI51997.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
serine/threonine protein kinase
SCN18_30_10_14_R2_B_scaffold_1121_23
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22091..22552)
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56B2
6,7-dimethyl-8-ribityllumazine synthase
SCN18_30_10_14_R2_B_scaffold_1121_24
unknown

Not on your lists

22689..23117
DNA (429bp) protein (143aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1121_25
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23339..25210
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5422
Calx-beta domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
SCN18_30_10_14_R2_B_scaffold_1121_26
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25303..26451
DNA (1149bp) protein (383aa)
Hemolysin-type calcium-binding region domain protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RJJ3_9PLAN
YD repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
SCN18_30_10_14_R2_B_scaffold_1121_27
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26456..26827)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DE98A0
bleomycin resistance protein
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:AGA25368.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1121_28
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

26983..28212
DNA (1230bp) protein (410aa)
ATP-dependent dsDNA exonuclease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AE3
sbcD; DNA repair exonuclease
Tax=RBG_16_Chloroflexi_64_32_curated
SCN18_30_10_14_R2_B_scaffold_1121_29
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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28557..31733
DNA (3177bp) protein (1059aa)
exonuclease SbcC n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AE4
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:CBH24997.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
Displaying items 1-30 of 42 in total

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