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SCN18_30_10_14_R2_B_scaffold_1224

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1224_1
unknown

Not on your lists

comp(3..1595)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030E0EC2
SCN18_30_10_14_R2_B_scaffold_1224_2
unknown

Not on your lists

1679..2326
DNA (648bp) protein (216aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_3
unknown

Not on your lists

2341..3261
DNA (921bp) protein (307aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_4
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3348..7424
DNA (4077bp) protein (1359aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41E6
Uncharacterized protein {ECO:0000313|EMBL:EAQ79204.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1224_5
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7750..9054
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41E5
Uncharacterized protein {ECO:0000313|EMBL:EDY17227.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1224_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9205..9888)
DNA (684bp) protein (228aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Endonuclease III n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C351_SPHTD
SCN18_30_10_14_R2_B_scaffold_1224_7
unknown

Not on your lists

comp(9967..10347)
DNA (381bp) protein (127aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10426..11886)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C37AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV60640.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1224_9
unknown

Not on your lists

comp(12583..12744)
DNA (162bp) protein (54aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_10
unknown

Not on your lists

13101..13379
DNA (279bp) protein (93aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_11
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13447..14250)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F88B68
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL05082.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
SCN18_30_10_14_R2_B_scaffold_1224_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14709..15332)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHU6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28261.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1224_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15322..15831)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG68_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28262.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1224_14
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16088..17254
DNA (1167bp) protein (389aa)
Beta-lactamase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY68_9BACT
beta-lactamase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCN18_30_10_14_R2_B_scaffold_1224_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17438..20110)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPM8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31202.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1224_16
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20315..21289)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DDA
hypothetical protein
Repeat-companion domain TIGR02996 {ECO:0000313|EMBL:AGA28644.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1224_17
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(21348..22784)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5749
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94329.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_1224_18
unknown

Not on your lists

comp(22861..23490)
DNA (630bp) protein (210aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1224_19
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

comp(23538..24215)
DNA (678bp) protein (226aa)
oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C568E
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB77178.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Displaying 19 items

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