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SCN18_30_10_14_R2_B_scaffold_1259

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1259_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..965)
DNA (963bp) protein (321aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZRK5_9PROT
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1259_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(958..1737)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK28_DESB2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48208.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1259_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1815..2132)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXI2_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV63030.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1259_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2132..2263)
DNA (132bp) protein (44aa)
SCN18_30_10_14_R2_B_scaffold_1259_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2260..3846)
DNA (1587bp) protein (529aa)
resolvase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C43FD
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:ADV63029.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1259_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3843..4346)
DNA (504bp) protein (168aa)
Putative bacteriophage related protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXI0_ISOPI
putative bacteriophage-like protein
Putative bacteriophage related protein {ECO:0000313|EMBL:ADV63028.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1259_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4417..4707)
DNA (291bp) protein (97aa)
SCN18_30_10_14_R2_B_scaffold_1259_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4996..7164
DNA (2169bp) protein (723aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FHP0_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO70312.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_30_10_14_R2_B_scaffold_1259_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7318..8406)
DNA (1089bp) protein (363aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D6F7C8
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
SCN18_30_10_14_R2_B_scaffold_1259_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8637..8858
DNA (222bp) protein (74aa)
SCN18_30_10_14_R2_B_scaffold_1259_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9576..9770)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C564D
SCN18_30_10_14_R2_B_scaffold_1259_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9817..11376)
DNA (1560bp) protein (520aa)
Transposase IS66 n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZY9_PIRSD
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ADB18354.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1259_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11411..11770)
DNA (360bp) protein (120aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C567D
Isocitrate lyase {ECO:0000313|EMBL:EWY38698.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
isocitrate lyase
SCN18_30_10_14_R2_B_scaffold_1259_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11764..12129)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C567E
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_30_10_14_R2_B_scaffold_1259_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12171..12338)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C564D
SCN18_30_10_14_R2_B_scaffold_1259_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12352..12624)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C564B
plasmid-like protein
Plasmid related protein {ECO:0000313|EMBL:ADY58571.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1259_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13156..20985)
DNA (7830bp) protein (2610aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E0101A
Uncharacterized protein {ECO:0000313|EMBL:KGM17813.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1259_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21111..22235)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B48
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_1259_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22314..22952
DNA (639bp) protein (213aa)
TPR repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B47
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADV61469.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Displaying 19 items

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