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SCN18_30_10_14_R2_B_scaffold_1335

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1335_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36BB
SCN18_30_10_14_R2_B_scaffold_1335_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96..635)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E680B1
membrane-bound dehydrogenase
Putative membrane-bound dehydrogenase {ECO:0000313|EMBL:AGA24869.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1335_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1863..2249)
DNA (387bp) protein (129aa)
SCN18_30_10_14_R2_B_scaffold_1335_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2282..3613)
DNA (1332bp) protein (444aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLN9_SINAD
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA29758.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1335_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4365..6170)
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B76
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA25937.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1335_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6716..8437)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R786_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15582.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1335_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8652..8786
DNA (135bp) protein (45aa)
SCN18_30_10_14_R2_B_scaffold_1335_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9224..10096)
DNA (873bp) protein (291aa)
carboxylesterase (EC:3.1.1.1)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FE0A4A
Tax=GWF2_Planctomycetes_42_9_curated
SCN18_30_10_14_R2_B_scaffold_1335_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10284..10718)
DNA (435bp) protein (145aa)
DoxX n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG43_9PLAN
DoxX {ECO:0000313|EMBL:EDL56336.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Putative doxX family protein
SCN18_30_10_14_R2_B_scaffold_1335_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10721..11566)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003048D72
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCN18_30_10_14_R2_B_scaffold_1335_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11574..12482)
DNA (909bp) protein (303aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NUG9_GRAMM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEU35325.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCN18_30_10_14_R2_B_scaffold_1335_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12512..12940)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E003B3
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGA24677.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1335_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13425..13922
DNA (498bp) protein (166aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EE4C36
alkylhydroperoxidase
SCN18_30_10_14_R2_B_scaffold_1335_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14535..15611
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B92
Uncharacterized protein {ECO:0000313|EMBL:EIJ34751.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1335_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15619..16146
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57D0
Uncharacterized protein {ECO:0000313|EMBL:KFA91709.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
SCN18_30_10_14_R2_B_scaffold_1335_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16154..18640
DNA (2487bp) protein (829aa)
pentapeptide repeat n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57CF
Uncharacterized protein {ECO:0000313|EMBL:KFA91709.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative low-complexity protein
SCN18_30_10_14_R2_B_scaffold_1335_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18649..18981
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A43
Uncharacterized protein {ECO:0000313|EMBL:KFA91710.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
SCN18_30_10_14_R2_B_scaffold_1335_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18985..20109
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A42
Uncharacterized protein {ECO:0000313|EMBL:KFA91710.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
SCN18_30_10_14_R2_B_scaffold_1335_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20203..21357
DNA (1155bp) protein (385aa)
ATPase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A41
ATPase AAA {ECO:0000313|EMBL:KFA91711.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ATPase family protein associated with various cellular activities (AAA)
SCN18_30_10_14_R2_B_scaffold_1335_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21354..21647
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A40
Uncharacterized protein {ECO:0000313|EMBL:KFA91712.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
Displaying 20 items

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