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SCN18_30_10_14_R2_B_scaffold_1529

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1529_1
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22..8445)
DNA (8424bp) protein (2808aa)
VCBS repeat-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSR4_SOLCM
VCBS repeat-containing protein
VCBS repeat-containing protein {ECO:0000313|EMBL:AFD05208.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_30_10_14_R2_B_scaffold_1529_2
unknown

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comp(8690..8854)
DNA (165bp) protein (55aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1529_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8894..9406)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGG9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX00866.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1529_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9434..10084)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95873.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_1529_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10321..11055)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95873.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_1529_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(11135..12628)
DNA (1494bp) protein (498aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
transcription termination factor Rho n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C558D
transcription termination factor Rho
SCN18_30_10_14_R2_B_scaffold_1529_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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13178..13726
DNA (549bp) protein (183aa)
ATP dependent DNA ligase-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG54_SINAD
ATP dependent DNA ligase-like protein
ATP dependent DNA ligase-like protein {ECO:0000313|EMBL:AGA27651.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1529_8
unknown

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comp(13825..14262)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C48D2
SCN18_30_10_14_R2_B_scaffold_1529_9
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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14357..15295
DNA (939bp) protein (313aa)
Delta-9 acyl-phospholipid desaturase (EC:1.14.19.-)
Fatty acid desaturase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C495B
Fatty acid desaturase {ECO:0000313|EMBL:KIG15923.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
SCN18_30_10_14_R2_B_scaffold_1529_10
unknown

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comp(15530..15889)
DNA (360bp) protein (120aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1529_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(16155..17741)
DNA (1587bp) protein (529aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46D5
proton-translocating NADH-quinone oxidoreductase, chain N
SCN18_30_10_14_R2_B_scaffold_1529_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17835..19097)
DNA (1263bp) protein (421aa)
proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46D6
proton-translocating NADH-quinone oxidoreductase subunit M
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:ADG69681.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying 12 items

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